Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485586

Identifier: 103485586

GI number: 103485586

Start: 91752

End: 92687

Strand: Reverse

Name: 103485586

Synonym: Sala_0088

Alternate gene names: NA

Gene position: 92687-91752 (Counterclockwise)

Preceding gene: 103485589

Following gene: 103485585

Centisome position: 2.77

GC content: 62.61

Gene sequence:

>936_bases
ATGCAACAAAATCTAGTTTCCTTGCGCGAGCATCGCGAGCTCGGCGACGTCGCCTGGCTGCGCGATCTGGACGCCGGTCT
CGCGGTCGCAGCCGAGCAGAGAAAACCGGTTCTGCTGCTCTTTCAGGAGGTGCCGGGCTGCTCGACGTGCGTGCGTTTCG
GGCAGGATGTACTGACCCATCCCTTGATGGTGGAACTTATCGCAGATCGGTTCGTGCCCGTGGCCATCTTCAACAACCGC
CCGGGGGCGGACGCCGAGATCCTGCGCCGCTTCGACGAGCCATCATGGAATAATCCCGTGGTGCGGTTTCTCGGGCCCGA
TGGCGCCGAGTTGCTGCCCAAGCTCGCCGATCGTTATGATGCGCCGGCTCTGCACCAAAAGATCGTCGCCGTGCTGGAAT
TGCTCGGCGGCGACGTTCCTGGCTACTTCCGCCTGTTGGGGCGCGACCTGCTGATCGAAAATGGCCTCAGCAAATCGGCG
ACCTACACGACGCCGTGCTTCTGGTCGGGCGAAACGAGCCTCGCGCAGCATCCGGCGGTCATCACGACCGACGCTGGCTG
GATCGATGGCGAGGAAGTGGTGCAGGTCCATTTCGATCCCCGCGCGGCGGCGCGTTCCGAACTCGATGCTTATGCCCACG
AGGAGGGATTTGGCGCGATCGACAGTGGCGGGTTCGCGCTTGACGGTGAACCGCAATTCTATCTGCGCAAAAATGCGGCG
CGCCATCTGCCGCTGACGCCGGCTCAGCGCACGCAGATCAACCTCGCTATACCCTATCGCACACCGCTCGCGGACTTTCT
CAGCCCGCAACAATGCGCGTGGCTAGCCAATCCGCGGCTAGAAGCACCGGGCGAGAATGAAGCCTATCGCAAGGACATTC
GCGAAAGCCGGCCCGTGCTGGCGCAGCGGCTTGGTTTGGTCGAAAAGGAGACATGA

Upstream 100 bases:

>100_bases
TAGCCTTTTCGGATTACGACACGATTGAGCCGGCTCTGGAATCACTTCGCGATAGCCCCGCTCGCATTGTATTGCGAACC
GCCCTCACTAGATTAGACCC

Downstream 100 bases:

>100_bases
TCATGGATATTGCTGCCATCGGCCTCATCGAAGACGAAGATATCCTGCTCGACCTGGCATCGCTCGCTCTCAGCCAACTC
GATCATGAAAATGCGGACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MQQNLVSLREHRELGDVAWLRDLDAGLAVAAEQRKPVLLLFQEVPGCSTCVRFGQDVLTHPLMVELIADRFVPVAIFNNR
PGADAEILRRFDEPSWNNPVVRFLGPDGAELLPKLADRYDAPALHQKIVAVLELLGGDVPGYFRLLGRDLLIENGLSKSA
TYTTPCFWSGETSLAQHPAVITTDAGWIDGEEVVQVHFDPRAAARSELDAYAHEEGFGAIDSGGFALDGEPQFYLRKNAA
RHLPLTPAQRTQINLAIPYRTPLADFLSPQQCAWLANPRLEAPGENEAYRKDIRESRPVLAQRLGLVEKET

Sequences:

>Translated_311_residues
MQQNLVSLREHRELGDVAWLRDLDAGLAVAAEQRKPVLLLFQEVPGCSTCVRFGQDVLTHPLMVELIADRFVPVAIFNNR
PGADAEILRRFDEPSWNNPVVRFLGPDGAELLPKLADRYDAPALHQKIVAVLELLGGDVPGYFRLLGRDLLIENGLSKSA
TYTTPCFWSGETSLAQHPAVITTDAGWIDGEEVVQVHFDPRAAARSELDAYAHEEGFGAIDSGGFALDGEPQFYLRKNAA
RHLPLTPAQRTQINLAIPYRTPLADFLSPQQCAWLANPRLEAPGENEAYRKDIRESRPVLAQRLGLVEKET
>Mature_311_residues
MQQNLVSLREHRELGDVAWLRDLDAGLAVAAEQRKPVLLLFQEVPGCSTCVRFGQDVLTHPLMVELIADRFVPVAIFNNR
PGADAEILRRFDEPSWNNPVVRFLGPDGAELLPKLADRYDAPALHQKIVAVLELLGGDVPGYFRLLGRDLLIENGLSKSA
TYTTPCFWSGETSLAQHPAVITTDAGWIDGEEVVQVHFDPRAAARSELDAYAHEEGFGAIDSGGFALDGEPQFYLRKNAA
RHLPLTPAQRTQINLAIPYRTPLADFLSPQQCAWLANPRLEAPGENEAYRKDIRESRPVLAQRLGLVEKET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34493; Mature: 34493

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQNLVSLREHRELGDVAWLRDLDAGLAVAAEQRKPVLLLFQEVPGCSTCVRFGQDVLTH
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH
PLMVELIADRFVPVAIFNNRPGADAEILRRFDEPSWNNPVVRFLGPDGAELLPKLADRYD
HHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCC
APALHQKIVAVLELLGGDVPGYFRLLGRDLLIENGLSKSATYTTPCFWSGETSLAQHPAV
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHCCEE
ITTDAGWIDGEEVVQVHFDPRAAARSELDAYAHEEGFGAIDSGGFALDGEPQFYLRKNAA
EEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCC
RHLPLTPAQRTQINLAIPYRTPLADFLSPQQCAWLANPRLEAPGENEAYRKDIRESRPVL
CCCCCCCCCCCEEEEEECCCCCHHHHCCCHHHHEECCCCCCCCCCCHHHHHHHHHCCHHH
AQRLGLVEKET
HHHHCCCCCCC
>Mature Secondary Structure
MQQNLVSLREHRELGDVAWLRDLDAGLAVAAEQRKPVLLLFQEVPGCSTCVRFGQDVLTH
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH
PLMVELIADRFVPVAIFNNRPGADAEILRRFDEPSWNNPVVRFLGPDGAELLPKLADRYD
HHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHCC
APALHQKIVAVLELLGGDVPGYFRLLGRDLLIENGLSKSATYTTPCFWSGETSLAQHPAV
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCHHHCCEE
ITTDAGWIDGEEVVQVHFDPRAAARSELDAYAHEEGFGAIDSGGFALDGEPQFYLRKNAA
EEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCC
RHLPLTPAQRTQINLAIPYRTPLADFLSPQQCAWLANPRLEAPGENEAYRKDIRESRPVL
CCCCCCCCCCCEEEEEECCCCCHHHHCCCHHHHEECCCCCCCCCCCHHHHHHHHHCCHHH
AQRLGLVEKET
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA