The gene/protein map for NC_009076 is currently unavailable.
Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yjgI [H]

Identifier: 103485583

GI number: 103485583

Start: 89692

End: 90405

Strand: Direct

Name: yjgI [H]

Synonym: Sala_0085

Alternate gene names: 103485583

Gene position: 89692-90405 (Clockwise)

Preceding gene: 103485576

Following gene: 103485587

Centisome position: 2.68

GC content: 66.95

Gene sequence:

>714_bases
ATGTCCAACTTTCAAGGAAAATCCGTTCTGGTCCTCGGCGGCAGCCGCGGAATCGGCGCGGCGATCGTCCGCCGTTTTGC
GTCCGACGGCGCCAAGGTCGTCTTCACCTACAACGGATCGCGCGAGGCGGCCGAGCAGCTGGCGACCGAAACCGGCACCA
GCGCGGTAGCGACCGACAGCGGCGACCGCGACGCAGTGATTGCACGCGTGCGCGAGAGCGGCCCGCTCGACATACTGGTC
GTCAACGCCGGCTTCGCGCTGTTCGGCGACGCGCTCGACCTCGATCCCGACGACGTCGACCGGCTGATCCGCGTCAACGT
CACCGCCCCCTATCATGCGTCGGTCGAGGCCGCGCGGCAGATGCCCGACGGCGGCCGCATCATCGTGATCGGTTCGGTAA
ACGGCGACCGCATGCCTCTCCCCGGCATGGCCTCCTATGCACTGAGCAAATCGGCGCTGCAGGGCATGGCGCGCGGACTG
GCCCGGGATTTCGGACCGCGCGGAATCACGATCAATATCGTGCAGCCCGGCCCGATCGATACCGACGCCAACCCCGAGGA
CGGACCGATGCGCGAGCTGATGCACAGCTTCATGGCGATCAAGCGCCACGGGCGGCCCGAAGAGGTCGCTGGCATGGTTG
CTTGGCTGGCTGGCCCCGAAGCGGGTTTTGTCACTGGCGCCATGCACACGATCGACGGCGCATTTGGTGCCTGA

Upstream 100 bases:

>100_bases
CGTGCGGGATCTATTTGTAGTAACCATTACAAAATGCCTTGACGATGGCTTTCGCGATATTATGTAGTGGACGATACATT
AATAAGCAAGGAGTCTCCCG

Downstream 100 bases:

>100_bases
GGTGGAGCAGGGGACGGTCGCAAGACCGCCCCCTTTGCCGACGGTCGCGCCTTAAATGGCAAGATTTGGCCGTGAGCAAG
CCCTGACTTACGGTCAGCAG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSNFQGKSVLVLGGSRGIGAAIVRRFASDGAKVVFTYNGSREAAEQLATETGTSAVATDSGDRDAVIARVRESGPLDILV
VNAGFALFGDALDLDPDDVDRLIRVNVTAPYHASVEAARQMPDGGRIIVIGSVNGDRMPLPGMASYALSKSALQGMARGL
ARDFGPRGITINIVQPGPIDTDANPEDGPMRELMHSFMAIKRHGRPEEVAGMVAWLAGPEAGFVTGAMHTIDGAFGA

Sequences:

>Translated_237_residues
MSNFQGKSVLVLGGSRGIGAAIVRRFASDGAKVVFTYNGSREAAEQLATETGTSAVATDSGDRDAVIARVRESGPLDILV
VNAGFALFGDALDLDPDDVDRLIRVNVTAPYHASVEAARQMPDGGRIIVIGSVNGDRMPLPGMASYALSKSALQGMARGL
ARDFGPRGITINIVQPGPIDTDANPEDGPMRELMHSFMAIKRHGRPEEVAGMVAWLAGPEAGFVTGAMHTIDGAFGA
>Mature_236_residues
SNFQGKSVLVLGGSRGIGAAIVRRFASDGAKVVFTYNGSREAAEQLATETGTSAVATDSGDRDAVIARVRESGPLDILVV
NAGFALFGDALDLDPDDVDRLIRVNVTAPYHASVEAARQMPDGGRIIVIGSVNGDRMPLPGMASYALSKSALQGMARGLA
RDFGPRGITINIVQPGPIDTDANPEDGPMRELMHSFMAIKRHGRPEEVAGMVAWLAGPEAGFVTGAMHTIDGAFGA

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=244, Percent_Identity=32.3770491803279, Blast_Score=115, Evalue=3e-26,
Organism=Homo sapiens, GI5031737, Length=230, Percent_Identity=31.304347826087, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI126723750, Length=240, Percent_Identity=30, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI66933014, Length=246, Percent_Identity=29.6747967479675, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=31.6939890710383, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI33667109, Length=183, Percent_Identity=32.2404371584699, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI7705925, Length=239, Percent_Identity=27.1966527196653, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI223718074, Length=238, Percent_Identity=32.3529411764706, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI15277342, Length=248, Percent_Identity=29.4354838709677, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI4503817, Length=224, Percent_Identity=26.3392857142857, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=27.1186440677966, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI19923817, Length=250, Percent_Identity=25.6, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4503301, Length=252, Percent_Identity=25.7936507936508, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI2367365, Length=237, Percent_Identity=78.0590717299578, Blast_Score=383, Evalue=1e-108,
Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=37.344398340249, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=34.251968503937, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=31.5573770491803, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI2367175, Length=243, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=29.2887029288703, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=31.3492063492063, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=26.7206477732794, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1786812, Length=245, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1787905, Length=246, Percent_Identity=30.4878048780488, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789208, Length=251, Percent_Identity=27.8884462151394, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787545, Length=254, Percent_Identity=25.9842519685039, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=260, Percent_Identity=31.5384615384615, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17560676, Length=242, Percent_Identity=30.1652892561983, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=261, Percent_Identity=31.0344827586207, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=28.4615384615385, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI193204405, Length=243, Percent_Identity=30.8641975308642, Blast_Score=84, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=30.241935483871, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=249, Percent_Identity=26.9076305220884, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=27.1255060728745, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=29.3172690763052, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=29.5454545454545, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71994604, Length=246, Percent_Identity=28.0487804878049, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17555706, Length=253, Percent_Identity=30.0395256916996, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=243, Percent_Identity=28.3950617283951, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562990, Length=245, Percent_Identity=28.1632653061224, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=252, Percent_Identity=26.5873015873016, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=264, Percent_Identity=26.5151515151515, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17536651, Length=255, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=27.6679841897233, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=242, Percent_Identity=28.9256198347107, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=265, Percent_Identity=25.6603773584906, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17508651, Length=244, Percent_Identity=26.2295081967213, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=199, Percent_Identity=31.6582914572864, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=25.8555133079848, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=251, Percent_Identity=20.7171314741036, Blast_Score=62, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=31.8548387096774, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI21357041, Length=250, Percent_Identity=30.4, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI21355319, Length=242, Percent_Identity=32.2314049586777, Blast_Score=99, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=30.4, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI23397609, Length=246, Percent_Identity=32.520325203252, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24639444, Length=243, Percent_Identity=30.0411522633745, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24644337, Length=171, Percent_Identity=31.5789473684211, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17737361, Length=250, Percent_Identity=28, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24748; Mature: 24617

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MSNFQGKSVLVLGGSRGIGAAIVRRFASDGAKVVFTYNGSREAAEQLATETGTSAVATDS
CCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCC
GDRDAVIARVRESGPLDILVVNAGFALFGDALDLDPDDVDRLIRVNVTAPYHASVEAARQ
CCCHHHEEEECCCCCEEEEEEECCHHEECCCCCCCHHHCCCEEEEEECCCCCHHHHHHHC
MPDGGRIIVIGSVNGDRMPLPGMASYALSKSALQGMARGLARDFGPRGITINIVQPGPID
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TDANPEDGPMRELMHSFMAIKRHGRPEEVAGMVAWLAGPEAGFVTGAMHTIDGAFGA
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCC
>Mature Secondary Structure 
SNFQGKSVLVLGGSRGIGAAIVRRFASDGAKVVFTYNGSREAAEQLATETGTSAVATDS
CCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCC
GDRDAVIARVRESGPLDILVVNAGFALFGDALDLDPDDVDRLIRVNVTAPYHASVEAARQ
CCCHHHEEEECCCCCEEEEEEECCHHEECCCCCCCHHHCCCEEEEEECCCCCHHHHHHHC
MPDGGRIIVIGSVNGDRMPLPGMASYALSKSALQGMARGLARDFGPRGITINIVQPGPID
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TDANPEDGPMRELMHSFMAIKRHGRPEEVAGMVAWLAGPEAGFVTGAMHTIDGAFGA
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]