Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485569

Identifier: 103485569

GI number: 103485569

Start: 77512

End: 78048

Strand: Direct

Name: 103485569

Synonym: Sala_0071

Alternate gene names: NA

Gene position: 77512-78048 (Clockwise)

Preceding gene: 103485563

Following gene: 103485576

Centisome position: 2.32

GC content: 60.71

Gene sequence:

>537_bases
TTGACGAACGCTGGCGACGCCAAAGCCGCCGGAATTTTATCGGGAGAAGTCATGCCCATCGTCAGCCGCTCATTGCTCGC
GCTCTTCTTCCCTTCGATGCTAATGGTCACACCGGCCTTCGCGGCACCGCCGCCGCCGCGGATCGATGTGATTGCCTACT
CCGCTGACCTTGGCGAAGAAGGCCTTGCTGAAGCCTATGTTACGCTGGCGGCCTACTCCGGCGCGTTCGAGCGGGCTGCC
CCGGGGACTGATCGCAGTAAGGTGCGGGCATGCGCAGCCTCGAATAGCGAGGCCTGCATTCGGGCCATCCTCACCGCACG
TGGAGGGGCAGCTGTGATCATCGTCGTGCAAGGGGCGGGAGTTGGCATCCAGAAATGGACTTGCTTCGGCTCGGGTGGCA
CCCCGGTCGACGCCGCAAAACAGACAGCCACGATCAATTTGCAAGTTGCTTTCTTTGGCGAACGGCAGGCTAAATTTCAG
CAATCTCTGTCTGCAACTGCCTGTATCATGTCGGCTGCCGCCGAGAGTGGGTGGTAA

Upstream 100 bases:

>100_bases
CTCCCGGCTCCGGGCTAACCGACACGTCGTAGCGAAGCAATTTGGAAATATGGCGGGTAGCCGCTAAGCAAAACGCCGGA
CCGTAAGTCGCGGAATTCCA

Downstream 100 bases:

>100_bases
AGATCACCGTGAAATTGTCGACGAACGTCAGTTTCTAAGCCCGAGTCCTCGAAGTTGCAAAATGGCGATCTCCAGATGCT
GCGGCCGCCGCACTCTTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTNAGDAKAAGILSGEVMPIVSRSLLALFFPSMLMVTPAFAAPPPPRIDVIAYSADLGEEGLAEAYVTLAAYSGAFERAA
PGTDRSKVRACAASNSEACIRAILTARGGAAVIIVVQGAGVGIQKWTCFGSGGTPVDAAKQTATINLQVAFFGERQAKFQ
QSLSATACIMSAAAESGW

Sequences:

>Translated_178_residues
MTNAGDAKAAGILSGEVMPIVSRSLLALFFPSMLMVTPAFAAPPPPRIDVIAYSADLGEEGLAEAYVTLAAYSGAFERAA
PGTDRSKVRACAASNSEACIRAILTARGGAAVIIVVQGAGVGIQKWTCFGSGGTPVDAAKQTATINLQVAFFGERQAKFQ
QSLSATACIMSAAAESGW
>Mature_177_residues
TNAGDAKAAGILSGEVMPIVSRSLLALFFPSMLMVTPAFAAPPPPRIDVIAYSADLGEEGLAEAYVTLAAYSGAFERAAP
GTDRSKVRACAASNSEACIRAILTARGGAAVIIVVQGAGVGIQKWTCFGSGGTPVDAAKQTATINLQVAFFGERQAKFQQ
SLSATACIMSAAAESGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18176; Mature: 18045

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNAGDAKAAGILSGEVMPIVSRSLLALFFPSMLMVTPAFAAPPPPRIDVIAYSADLGEE
CCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC
GLAEAYVTLAAYSGAFERAAPGTDRSKVRACAASNSEACIRAILTARGGAAVIIVVQGAG
HHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCC
VGIQKWTCFGSGGTPVDAAKQTATINLQVAFFGERQAKFQQSLSATACIMSAAAESGW
CCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TNAGDAKAAGILSGEVMPIVSRSLLALFFPSMLMVTPAFAAPPPPRIDVIAYSADLGEE
CCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC
GLAEAYVTLAAYSGAFERAAPGTDRSKVRACAASNSEACIRAILTARGGAAVIIVVQGAG
HHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEECCC
VGIQKWTCFGSGGTPVDAAKQTATINLQVAFFGERQAKFQQSLSATACIMSAAAESGW
CCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA