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The map label for this gene is 103485555

Identifier: 103485555

GI number: 103485555

Start: 62767

End: 63480

Strand: Reverse

Name: 103485555

Synonym: Sala_0057

Alternate gene names: NA

Gene position: 63480-62767 (Counterclockwise)

Preceding gene: 103485564

Following gene: 103485554

Centisome position: 1.9

GC content: 61.2

Gene sequence:

>714_bases
GTGAAAGAGGATACCGTCGATCCAGAGGCACCGCGTCATCCCGGCTTCGTGCGCAAAGCGCTGGACTGGGCGGAGGATCT
GTCCGCGCAAGAGATTTTGACGGCGGCGAGGATCAAGGACCGGACGGCTAGCGGTTATCTCCCGTCAGCGGCGCTGGTTC
GACTCGTTCGCCGGTATCGAACTGAGGGAGACGATGACAGCAGCACCCGCCTCAGCACGCTCCTAATTGCGCGCGCCTAC
GAATATGTACGCGGCATCTACGCCCGGATGGGCGTTGACGGCCAAGATGTGGTCCAAGAGACCATGCAGACATTCCTAAC
TGAGCTCGCCGAACAGGACGGGGTCGACTGGTGGGAGGCGACCTTCGAGCGTGAATTGCGGCGTCGGGCGGCCGATGCGT
ATCGGCATCTGTTCAAGCGCCACCGATCGCGCAGCTTGGTATTGCCCGAAGATCACGATCGGGGCGACGACGGCGAAGAA
GCCCATGAGATCGCACGCCGAGCCGCCCTTGCGGCCTTCGCCGAGGTGCGCATTCCCACCGAGAAAAAGCGCCGATTATT
CCTTTTGCTAATGTTGAATGAATTGCCGATCGATGCGCCCGAGGCGCCGAATGACCTCGTCCGGCTGACCGGAATCCCGC
GCAGCACATTGGCCAATCTCAAGACTGAATTCGGGCGCATGCTCAAATCGGCGCTCGCGGAGAAGACGTCATGA

Upstream 100 bases:

>100_bases
CTCTGAAGCGGCCGAGTCGAGCGCCCGAAAAATAGTTCAGAGCTTTTCCTAGTGACAAATCGAATGAGATTCCGGACGTT
CAACAGTTAGGAACACTGGC

Downstream 100 bases:

>100_bases
AAAATATCAATCCAAACCTCGGCAGACTGGCCGAAGACTATATCGTCAGCGGCGCCTGGGACCCCGAACTAGTGGACAAG
CTCGGTCCGGACGAACTCGA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKEDTVDPEAPRHPGFVRKALDWAEDLSAQEILTAARIKDRTASGYLPSAALVRLVRRYRTEGDDDSSTRLSTLLIARAY
EYVRGIYARMGVDGQDVVQETMQTFLTELAEQDGVDWWEATFERELRRRAADAYRHLFKRHRSRSLVLPEDHDRGDDGEE
AHEIARRAALAAFAEVRIPTEKKRRLFLLLMLNELPIDAPEAPNDLVRLTGIPRSTLANLKTEFGRMLKSALAEKTS

Sequences:

>Translated_237_residues
MKEDTVDPEAPRHPGFVRKALDWAEDLSAQEILTAARIKDRTASGYLPSAALVRLVRRYRTEGDDDSSTRLSTLLIARAY
EYVRGIYARMGVDGQDVVQETMQTFLTELAEQDGVDWWEATFERELRRRAADAYRHLFKRHRSRSLVLPEDHDRGDDGEE
AHEIARRAALAAFAEVRIPTEKKRRLFLLLMLNELPIDAPEAPNDLVRLTGIPRSTLANLKTEFGRMLKSALAEKTS
>Mature_237_residues
MKEDTVDPEAPRHPGFVRKALDWAEDLSAQEILTAARIKDRTASGYLPSAALVRLVRRYRTEGDDDSSTRLSTLLIARAY
EYVRGIYARMGVDGQDVVQETMQTFLTELAEQDGVDWWEATFERELRRRAADAYRHLFKRHRSRSLVLPEDHDRGDDGEE
AHEIARRAALAAFAEVRIPTEKKRRLFLLLMLNELPIDAPEAPNDLVRLTGIPRSTLANLKTEFGRMLKSALAEKTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27019; Mature: 27019

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEDTVDPEAPRHPGFVRKALDWAEDLSAQEILTAARIKDRTASGYLPSAALVRLVRRYR
CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
TEGDDDSSTRLSTLLIARAYEYVRGIYARMGVDGQDVVQETMQTFLTELAEQDGVDWWEA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
TFERELRRRAADAYRHLFKRHRSRSLVLPEDHDRGDDGEEAHEIARRAALAAFAEVRIPT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
EKKRRLFLLLMLNELPIDAPEAPNDLVRLTGIPRSTLANLKTEFGRMLKSALAEKTS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKEDTVDPEAPRHPGFVRKALDWAEDLSAQEILTAARIKDRTASGYLPSAALVRLVRRYR
CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHC
TEGDDDSSTRLSTLLIARAYEYVRGIYARMGVDGQDVVQETMQTFLTELAEQDGVDWWEA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
TFERELRRRAADAYRHLFKRHRSRSLVLPEDHDRGDDGEEAHEIARRAALAAFAEVRIPT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
EKKRRLFLLLMLNELPIDAPEAPNDLVRLTGIPRSTLANLKTEFGRMLKSALAEKTS
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA