| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103485552
Identifier: 103485552
GI number: 103485552
Start: 58298
End: 58759
Strand: Reverse
Name: 103485552
Synonym: Sala_0054
Alternate gene names: NA
Gene position: 58759-58298 (Counterclockwise)
Preceding gene: 103485553
Following gene: 103485551
Centisome position: 1.76
GC content: 63.42
Gene sequence:
>462_bases ATGCCCATCGACATCTTCATCAAGCGGGGCGGAAGCCTCGAAGTCCAGCACCAGAAGGCCGAGAGCTTCGATCTCGCTCA TATCAAGCGCAAGCTCGACGAAGTGTTCGGCGCAGGCCACCTCTTCCTCGAAGACGGCGACGAGCCGATCGCCGCGGACC ATAAGGTCGAGGGCGGCAGCATTTTCGTCCATCATAACCGGTGCAAGCAGATCGAAGTGACCGTGCGCTATGCCGGCAAG GCGTTCGAGCACGGCTTCACCCCGGGCACGACCCTCAAGAAGATCAAGCGCCGCGCCGAAAAGAAGTTGGATATCGACCC GGCCGATGCCGTCGAGCTGTCGCTGCAGCTCGCCGGCACGACCGAGCGGCCGGACGAGGCAACCCATGTGGGCTCGCTGG CGCAGCCCAAGACTTGCGCCGTCGCCTTCGATCTCGTCCCCTCCGACCGCATCAACGGCTGA
Upstream 100 bases:
>100_bases GGGCCGAGACCGCCTGACAAGGATCAGACGTTTTCCGGGTGAGCCAACGATGACTTGTTGAGACCGGCGTTCCTGCCCGG TCGATCAACGGAGTCATACG
Downstream 100 bases:
>100_bases GATGACTCCGGACCGCGTCATCTTCGAGCGCGACATTGCCGCGGCGCCCTTTCTGGAGGGCGCCGCACGCAATCGATGGG CGCTGCGAACCCTCGAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MPIDIFIKRGGSLEVQHQKAESFDLAHIKRKLDEVFGAGHLFLEDGDEPIAADHKVEGGSIFVHHNRCKQIEVTVRYAGK AFEHGFTPGTTLKKIKRRAEKKLDIDPADAVELSLQLAGTTERPDEATHVGSLAQPKTCAVAFDLVPSDRING
Sequences:
>Translated_153_residues MPIDIFIKRGGSLEVQHQKAESFDLAHIKRKLDEVFGAGHLFLEDGDEPIAADHKVEGGSIFVHHNRCKQIEVTVRYAGK AFEHGFTPGTTLKKIKRRAEKKLDIDPADAVELSLQLAGTTERPDEATHVGSLAQPKTCAVAFDLVPSDRING >Mature_152_residues PIDIFIKRGGSLEVQHQKAESFDLAHIKRKLDEVFGAGHLFLEDGDEPIAADHKVEGGSIFVHHNRCKQIEVTVRYAGKA FEHGFTPGTTLKKIKRRAEKKLDIDPADAVELSLQLAGTTERPDEATHVGSLAQPKTCAVAFDLVPSDRING
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16808; Mature: 16677
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDIFIKRGGSLEVQHQKAESFDLAHIKRKLDEVFGAGHLFLEDGDEPIAADHKVEGGS CCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCE IFVHHNRCKQIEVTVRYAGKAFEHGFTPGTTLKKIKRRAEKKLDIDPADAVELSLQLAGT EEEECCCCCEEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC TERPDEATHVGSLAQPKTCAVAFDLVPSDRING CCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure PIDIFIKRGGSLEVQHQKAESFDLAHIKRKLDEVFGAGHLFLEDGDEPIAADHKVEGGS CEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCE IFVHHNRCKQIEVTVRYAGKAFEHGFTPGTTLKKIKRRAEKKLDIDPADAVELSLQLAGT EEEECCCCCEEEEEEEECCHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCC TERPDEATHVGSLAQPKTCAVAFDLVPSDRING CCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA