| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is phoK [H]
Identifier: 103485542
GI number: 103485542
Start: 44414
End: 46099
Strand: Direct
Name: phoK [H]
Synonym: Sala_0044
Alternate gene names: 103485542
Gene position: 44414-46099 (Clockwise)
Preceding gene: 103485536
Following gene: 103485543
Centisome position: 1.33
GC content: 68.86
Gene sequence:
>1686_bases ATGGAGACGCCGCCCGTGAAGCTCAAATATCCGATCGCCGCCCTTGTGGGTGCGCTTTGCCTTGCCGGTGCCGGAACCAC GGTCGCGCAGGAGGCGGCGCCCGCCGCGCGCCGCGCGACCGCCGCGATCCAGGCCCCCAAACTGCTCGTCGTGATCGCGG TCGACCAGCTGTCGGCCGATCTCTTCGCCGAATATCGTGGCCGCTTCCGCGGCGGTCTTGCGCGGCTCGCAACGGGGGTC GTCTTTCCCTCGGCCTATCAGGCGCACGGCGCGACCGAGACTTGCCCCGGCCATTCGACGATCCTGACCGGCAGCCACCC CGCGCGCACCGGCGTCGTCGCGAACAATTATTTCGACCTGTCGGTCGCGCGCGCCGACAAGCGCGTCTATTGCGCCGAGG ACGAAACGGTGCCGGACACCAGTTCGGGCAGCGGCAAATATGCGCCGTCGGTCAAGCATCTGCTCGTCCCGACGCTCGGC GATCTGATGAAGGCGCGCGATCCGCAGGCGCAGGTCGTGTCGGTCGCGGGCAAGGACCGCGCCGCGATCATGATGGGCGG GCACCGCGCCGACGAGACGCTGTGGCTCGCGCCCACCGGCCTCACCAGCTATCGCGGTAAGGCGCTGTCGCCGACTGCCG AGCGCGCGGCTACGGTGATCGCCGCGGCGATCAACCAGCCGCGCGGGCCGCTGACGCTGCCCGCCGAATGTGCGGCGCAG GATATTGCGATCCCGCTCGCGAACGGCGCGTCGGTCGGCACCGGGCGAATGGCGCGCGATGCGGGCGATTTCCGCCGCTT CCTGGCCTCACCCGAAGCCGATGGCGCGGTGCTTGCGACCGCCGCCGCGCTGCGTCAGGCGCGCCGGATGGGCCAAGGCA GCGGCACCGACCTGCTGATCATCGGCCTGTCGGCGACCGATTATGTCGGGCACGGCACGGGGACCGAGGGCAGCGAAATG TGCCTGCAACTCGCTGGCCTCGACCGCGAGCTTGGCGATTTTCTTGCGCGGCTCGATGCGACCGGGATGAACTATGCCGT CGTGCTGACCGCCGATCATGGCGGGCACGACCTCCCCGAACGCAACCGCCAGAATGCGTGGCCCGACGCGCAGCGCATCG ACACGGCGCTGGACCCCGAGGCGCTGGGCAATGAGGTAGCCGAAAAGCTGGGCCTGCCGCAGCCTTTGCTCCATGGCGAG GGCGGCGACTATTATCTCTCGAAGGCCCTGACCGCTGCGCAGCGCAAAGCCGCGCTTGCCGAGATATTGCCGCGCCTGCG CGCGCATCCGCAGGTCGAAATGGTCGCGACCCGCGACGAACTGGCGGCGCATCCCATCTCCAGACGCGCGCCCGATATGT GGAGCGTGATGGACCGGCTGCGCGCTTCCTTTCACCCCGACCGGTCGGGCGATTTCATCGTCGCGCTCAAGCCCCGCGTC ACCCCGATCGCCGAACCGGGCGTGGGCTATGTCGCGACGCACGGATCGGTGTGGGATTATGACCGCCGCGTGCCGATGAT CTTCTGGCGCAAGGACCTTGCCGGGTTCGAGCAGCCCAATGCCGTGATGACGGTCGACATCATGCCGACGCTCGCGGCAC TGATCGGCCTGCCGGTCGATGCGGGCGCCATCGATGGCCGCTGCCTCGACCTGGTTTCGGGTCCGGACAGCAGTTGCCAA CAATAA
Upstream 100 bases:
>100_bases ACTCGCCAATTTCATGCTCCGTCTGCGGCCGTTCGCCGTTCGAAGGCTTGCCATATAGGCGGCTTTCGTCGAGAGGACAG CCCGCGCTGACACCCGCCCG
Downstream 100 bases:
>100_bases ATGAAGACCAGGGGATCATGACGAAGAGATTGAAGGATTTTCAGGGCCGGATGCTGCTGGTCGGGTGCGGCAACATGGCC GGCGCGATGCTCGATCGCTG
Product: type I phosphodiesterase/nucleotide pyrophosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 561; Mature: 561
Protein sequence:
>561_residues METPPVKLKYPIAALVGALCLAGAGTTVAQEAAPAARRATAAIQAPKLLVVIAVDQLSADLFAEYRGRFRGGLARLATGV VFPSAYQAHGATETCPGHSTILTGSHPARTGVVANNYFDLSVARADKRVYCAEDETVPDTSSGSGKYAPSVKHLLVPTLG DLMKARDPQAQVVSVAGKDRAAIMMGGHRADETLWLAPTGLTSYRGKALSPTAERAATVIAAAINQPRGPLTLPAECAAQ DIAIPLANGASVGTGRMARDAGDFRRFLASPEADGAVLATAAALRQARRMGQGSGTDLLIIGLSATDYVGHGTGTEGSEM CLQLAGLDRELGDFLARLDATGMNYAVVLTADHGGHDLPERNRQNAWPDAQRIDTALDPEALGNEVAEKLGLPQPLLHGE GGDYYLSKALTAAQRKAALAEILPRLRAHPQVEMVATRDELAAHPISRRAPDMWSVMDRLRASFHPDRSGDFIVALKPRV TPIAEPGVGYVATHGSVWDYDRRVPMIFWRKDLAGFEQPNAVMTVDIMPTLAALIGLPVDAGAIDGRCLDLVSGPDSSCQ Q
Sequences:
>Translated_561_residues METPPVKLKYPIAALVGALCLAGAGTTVAQEAAPAARRATAAIQAPKLLVVIAVDQLSADLFAEYRGRFRGGLARLATGV VFPSAYQAHGATETCPGHSTILTGSHPARTGVVANNYFDLSVARADKRVYCAEDETVPDTSSGSGKYAPSVKHLLVPTLG DLMKARDPQAQVVSVAGKDRAAIMMGGHRADETLWLAPTGLTSYRGKALSPTAERAATVIAAAINQPRGPLTLPAECAAQ DIAIPLANGASVGTGRMARDAGDFRRFLASPEADGAVLATAAALRQARRMGQGSGTDLLIIGLSATDYVGHGTGTEGSEM CLQLAGLDRELGDFLARLDATGMNYAVVLTADHGGHDLPERNRQNAWPDAQRIDTALDPEALGNEVAEKLGLPQPLLHGE GGDYYLSKALTAAQRKAALAEILPRLRAHPQVEMVATRDELAAHPISRRAPDMWSVMDRLRASFHPDRSGDFIVALKPRV TPIAEPGVGYVATHGSVWDYDRRVPMIFWRKDLAGFEQPNAVMTVDIMPTLAALIGLPVDAGAIDGRCLDLVSGPDSSCQ Q >Mature_561_residues METPPVKLKYPIAALVGALCLAGAGTTVAQEAAPAARRATAAIQAPKLLVVIAVDQLSADLFAEYRGRFRGGLARLATGV VFPSAYQAHGATETCPGHSTILTGSHPARTGVVANNYFDLSVARADKRVYCAEDETVPDTSSGSGKYAPSVKHLLVPTLG DLMKARDPQAQVVSVAGKDRAAIMMGGHRADETLWLAPTGLTSYRGKALSPTAERAATVIAAAINQPRGPLTLPAECAAQ DIAIPLANGASVGTGRMARDAGDFRRFLASPEADGAVLATAAALRQARRMGQGSGTDLLIIGLSATDYVGHGTGTEGSEM CLQLAGLDRELGDFLARLDATGMNYAVVLTADHGGHDLPERNRQNAWPDAQRIDTALDPEALGNEVAEKLGLPQPLLHGE GGDYYLSKALTAAQRKAALAEILPRLRAHPQVEMVATRDELAAHPISRRAPDMWSVMDRLRASFHPDRSGDFIVALKPRV TPIAEPGVGYVATHGSVWDYDRRVPMIFWRKDLAGFEQPNAVMTVDIMPTLAALIGLPVDAGAIDGRCLDLVSGPDSSCQ Q
Specific function: Precipitates uranium from alkaline solutions [H]
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR002591 [H]
Pfam domain/function: PF01663 Phosphodiest [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 59173; Mature: 59173
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METPPVKLKYPIAALVGALCLAGAGTTVAQEAAPAARRATAAIQAPKLLVVIAVDQLSAD CCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHCCCCEEEEEEECHHHHH LFAEYRGRFRGGLARLATGVVFPSAYQAHGATETCPGHSTILTGSHPARTGVVANNYFDL HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCEEECCEEEE SVARADKRVYCAEDETVPDTSSGSGKYAPSVKHLLVPTLGDLMKARDPQAQVVSVAGKDR EEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCC AAIMMGGHRADETLWLAPTGLTSYRGKALSPTAERAATVIAAAINQPRGPLTLPAECAAQ EEEEECCCCCCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHC DIAIPLANGASVGTGRMARDAGDFRRFLASPEADGAVLATAAALRQARRMGQGSGTDLLI CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE IGLSATDYVGHGTGTEGSEMCLQLAGLDRELGDFLARLDATGMNYAVVLTADHGGHDLPE EEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC RNRQNAWPDAQRIDTALDPEALGNEVAEKLGLPQPLLHGEGGDYYLSKALTAAQRKAALA CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH EILPRLRAHPQVEMVATRDELAAHPISRRAPDMWSVMDRLRASFHPDRSGDFIVALKPRV HHHHHHHCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCC TPIAEPGVGYVATHGSVWDYDRRVPMIFWRKDLAGFEQPNAVMTVDIMPTLAALIGLPVD CCCCCCCCCEEEECCCCCCCCCCCCEEEEECHHCCCCCCCCEEEEEHHHHHHHHHCCCCC AGAIDGRCLDLVSGPDSSCQQ CCCCCCEEEEECCCCCHHCCC >Mature Secondary Structure METPPVKLKYPIAALVGALCLAGAGTTVAQEAAPAARRATAAIQAPKLLVVIAVDQLSAD CCCCCCEEECCHHHHHHHHHHCCCCCHHHHHHCHHHHHHHHHHCCCCEEEEEEECHHHHH LFAEYRGRFRGGLARLATGVVFPSAYQAHGATETCPGHSTILTGSHPARTGVVANNYFDL HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCEEEECCCCCCCCEEECCEEEE SVARADKRVYCAEDETVPDTSSGSGKYAPSVKHLLVPTLGDLMKARDPQAQVVSVAGKDR EEECCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCC AAIMMGGHRADETLWLAPTGLTSYRGKALSPTAERAATVIAAAINQPRGPLTLPAECAAQ EEEEECCCCCCCEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHC DIAIPLANGASVGTGRMARDAGDFRRFLASPEADGAVLATAAALRQARRMGQGSGTDLLI CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEE IGLSATDYVGHGTGTEGSEMCLQLAGLDRELGDFLARLDATGMNYAVVLTADHGGHDLPE EEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC RNRQNAWPDAQRIDTALDPEALGNEVAEKLGLPQPLLHGEGGDYYLSKALTAAQRKAALA CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHHHH EILPRLRAHPQVEMVATRDELAAHPISRRAPDMWSVMDRLRASFHPDRSGDFIVALKPRV HHHHHHHCCCCEEEEECHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCC TPIAEPGVGYVATHGSVWDYDRRVPMIFWRKDLAGFEQPNAVMTVDIMPTLAALIGLPVD CCCCCCCCCEEEECCCCCCCCCCCCEEEEECHHCCCCCCCCEEEEEHHHHHHHHHCCCCC AGAIDGRCLDLVSGPDSSCQQ CCCCCCEEEEECCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA