Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103485536

Identifier: 103485536

GI number: 103485536

Start: 38833

End: 39786

Strand: Direct

Name: 103485536

Synonym: Sala_0038

Alternate gene names: NA

Gene position: 38833-39786 (Clockwise)

Preceding gene: 103485535

Following gene: 103485542

Centisome position: 1.16

GC content: 66.88

Gene sequence:

>954_bases
ATGATCCGATCGCTCCTTCGTCGGCCGCTGCTGCCGCTGCTCGCTCTTCCATTGCTGCTCGCACCGGCGCCGTTGCCTGC
GCAAAGTGGCGGCGCGCCCTATCACGTCGATGGTCGTGGTTTTACGCGCCTTCAGGACGCCGTCGATGCGATCGGCGAGG
GCGAGGGGACGATCCGCATCGCGGCCGGCTATCATCGCGACTGCGCCGTACAGACCGCGGGCCGCATCGCCTTTGTCGCG
TCCGAACCCGGACGCGCGATCTTCGATGGCGTGACGTGCGAGGGCAAGGCGGCGCTGGTGCTGCGGGGGCAGGGCGCGCG
CGTCGACGGCCTTGTGTTCCAGAATATGCGCGTCCCCGACGGCAATGGTGCGGGCATCCGGCTGGAGACGAGCGACCTTG
ACGTCGTGAACGCGATGTTCCGCAACAGCGAACAGGGCATTTTGACCGCCGACGATCCCGAGGCGGCGTTGACCATCGAC
CGCTCGACCTTTTCGCGGCTCGGCCGCTGCGATCGCGGCCTCAGCTGCGCGCACAGCGTCTACACCGGCCTCTATGGCCG
CGTGACCGTCACCCGCGCCCGCTTTGAAAAGGGCAGCGGCGGCCATTATCTGAAAACGCGCGCGGCCCGCGTCGATGTGA
GCGACAACAGCTTCGACGACACGCAGGGCACCGGCACCAATTATATGATCGACCTGCCATCCGGTTCGACCGGGCGGATT
ATAGGCAATCTGTTCGTGCAGGGGCGCGACAAGGAAAATTATTCGGCCTTCATCGCGGTCGCGGCCGAAGAGCGCAAGAA
TCCGTCGCGCGGCCTCGTCATCGAAGGCAATCGCGCCAGCCTGCCCGCGGGGATGGGCCGCCGATCGGTGTTTGTCGCCG
ACTGGAGCGGCGAGGCGCTGGCGATCGGCGCGAACGAGCTGGGCGCGGGGCTGGCGCGTTTCGAAAAGCGGTAG

Upstream 100 bases:

>100_bases
CCATTAATTCCGATCGGCGCGCCTGTCCGAAAGCGAGACAGGCGTGCCGTTAACCAGCTTCGCGAACGACCGCCGTGCCG
AAGGGCGCTATACGGCACGC

Downstream 100 bases:

>100_bases
GCTTATGCCTCGCCGCGCGTTTCGATCAGCGAGGCGGCGAGCGCTTCTGCGGGGGTCTTGCCGCCCCACAGCACGAACTG
AAACACCGGATAAAAGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MIRSLLRRPLLPLLALPLLLAPAPLPAQSGGAPYHVDGRGFTRLQDAVDAIGEGEGTIRIAAGYHRDCAVQTAGRIAFVA
SEPGRAIFDGVTCEGKAALVLRGQGARVDGLVFQNMRVPDGNGAGIRLETSDLDVVNAMFRNSEQGILTADDPEAALTID
RSTFSRLGRCDRGLSCAHSVYTGLYGRVTVTRARFEKGSGGHYLKTRAARVDVSDNSFDDTQGTGTNYMIDLPSGSTGRI
IGNLFVQGRDKENYSAFIAVAAEERKNPSRGLVIEGNRASLPAGMGRRSVFVADWSGEALAIGANELGAGLARFEKR

Sequences:

>Translated_317_residues
MIRSLLRRPLLPLLALPLLLAPAPLPAQSGGAPYHVDGRGFTRLQDAVDAIGEGEGTIRIAAGYHRDCAVQTAGRIAFVA
SEPGRAIFDGVTCEGKAALVLRGQGARVDGLVFQNMRVPDGNGAGIRLETSDLDVVNAMFRNSEQGILTADDPEAALTID
RSTFSRLGRCDRGLSCAHSVYTGLYGRVTVTRARFEKGSGGHYLKTRAARVDVSDNSFDDTQGTGTNYMIDLPSGSTGRI
IGNLFVQGRDKENYSAFIAVAAEERKNPSRGLVIEGNRASLPAGMGRRSVFVADWSGEALAIGANELGAGLARFEKR
>Mature_317_residues
MIRSLLRRPLLPLLALPLLLAPAPLPAQSGGAPYHVDGRGFTRLQDAVDAIGEGEGTIRIAAGYHRDCAVQTAGRIAFVA
SEPGRAIFDGVTCEGKAALVLRGQGARVDGLVFQNMRVPDGNGAGIRLETSDLDVVNAMFRNSEQGILTADDPEAALTID
RSTFSRLGRCDRGLSCAHSVYTGLYGRVTVTRARFEKGSGGHYLKTRAARVDVSDNSFDDTQGTGTNYMIDLPSGSTGRI
IGNLFVQGRDKENYSAFIAVAAEERKNPSRGLVIEGNRASLPAGMGRRSVFVADWSGEALAIGANELGAGLARFEKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33708; Mature: 33708

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSLLRRPLLPLLALPLLLAPAPLPAQSGGAPYHVDGRGFTRLQDAVDAIGEGEGTIRI
CCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEE
AAGYHRDCAVQTAGRIAFVASEPGRAIFDGVTCEGKAALVLRGQGARVDGLVFQNMRVPD
EECCCCCEEEECCCEEEEEECCCCCEEECCEECCCCEEEEEECCCCCCCEEEEECEECCC
GNGAGIRLETSDLDVVNAMFRNSEQGILTADDPEAALTIDRSTFSRLGRCDRGLSCAHSV
CCCCEEEEECCCCHHHHHHHCCCCCCEEEECCCCEEEEEEHHHHHHHHCCCCCHHHHHHH
YTGLYGRVTVTRARFEKGSGGHYLKTRAARVDVSDNSFDDTQGTGTNYMIDLPSGSTGRI
HHCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEE
IGNLFVQGRDKENYSAFIAVAAEERKNPSRGLVIEGNRASLPAGMGRRSVFVADWSGEAL
EEEEEEECCCCCCCEEEEEEEEHHCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEE
AIGANELGAGLARFEKR
EECCHHHHHHHHHHCCC
>Mature Secondary Structure
MIRSLLRRPLLPLLALPLLLAPAPLPAQSGGAPYHVDGRGFTRLQDAVDAIGEGEGTIRI
CCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEE
AAGYHRDCAVQTAGRIAFVASEPGRAIFDGVTCEGKAALVLRGQGARVDGLVFQNMRVPD
EECCCCCEEEECCCEEEEEECCCCCEEECCEECCCCEEEEEECCCCCCCEEEEECEECCC
GNGAGIRLETSDLDVVNAMFRNSEQGILTADDPEAALTIDRSTFSRLGRCDRGLSCAHSV
CCCCEEEEECCCCHHHHHHHCCCCCCEEEECCCCEEEEEEHHHHHHHHCCCCCHHHHHHH
YTGLYGRVTVTRARFEKGSGGHYLKTRAARVDVSDNSFDDTQGTGTNYMIDLPSGSTGRI
HHCCCCEEEEEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCEE
IGNLFVQGRDKENYSAFIAVAAEERKNPSRGLVIEGNRASLPAGMGRRSVFVADWSGEAL
EEEEEEECCCCCCCEEEEEEEEHHCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCEE
AIGANELGAGLARFEKR
EECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA