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The map label for this gene is cirA [C]

Identifier: 103485525

GI number: 103485525

Start: 22212

End: 24476

Strand: Reverse

Name: cirA [C]

Synonym: Sala_0027

Alternate gene names: 103485525

Gene position: 24476-22212 (Counterclockwise)

Preceding gene: 103485526

Following gene: 103485523

Centisome position: 0.73

GC content: 65.03

Gene sequence:

>2265_bases
ATGCGCCATCTTCCTTCCGCCCTTGCCATGAGCGTCGCCCTCGCTGCCGCCGCGGTCGCCCCCGCCGCCGCACAGGAGGC
TTCGGTCGTCGCCGCCGAAGAAGGCAGCGGCCTTGGCGACATCGTCGTCACGGCGCAGCGCCGCGAGGAAAGCCTGCAGG
ATGTGCCGGTGTCGGTCAGCGTATTGTCGGGCGACACGCTGGGCGCGATCACCTCGACCGGCGCCGACATCCGCGCGCTC
GCGGGCCGCGTCCCCAGCCTCAACATCGAAAGCTCCTATGGCCGCTCCTTTCCGCGCTTCTATATCCGCGGCCTCGGCAA
CACCGACTTCGACCTCAACGCCTCGCAACCGGTCAGTCTCGTTTACGACGAGGTCGTGCTCGAAAACCCGATCCTGAAAG
GCTTTCCGATCTTCGACCTCGACCGCGTCGAGGTGCTGCGCGGGCCGCAGGGCACGCTCTTCGGCCGCAACACCCCCGCG
GGCATCGTCAAGTTCGACACCGTCAAGCCCGGCAAGACCGGCGGCTATGCGCGCGCCAGCTATGGCCGTTACGGCACCAG
CCAGGTCGAAGTCGCGGCGGGCGCCGCCGACGACAATGGCTTTTCGGTGCGCCTCTCGGGCCTCTATCAGCATCGCGACG
ACTGGGTCGACAATATCGCCACCACCGCAAAGGACGATCTCGGCGGCTATGACGACATCGCCGCGCGGCTCCAGTTGCAA
TATGAAAACGGCCCCTTTACCGGTCGCGTAACCGGGCAGGTTCGCGTCTTCGACGGCTCGGCGATCATCTTCCGCGCCAA
TACGCAGCTGCCGGGCAGCAACCGCCTTGTCGGCCTCGGCGGCGCGGACACCGCGTTCGAGCGCGACAAGGTGTGGCAGG
ACGGAATCAATTTCCAGAAGCTCAACACCTATAATGCCGCATTGAACCTCGAATATGATTTCGGCGCGGTGACCGCCTAT
TCGATCACCTCCTACTGGAACGGCAATTTCAAGAGCCGCGGCGACATCGACGGCGGCTTCGGCGCGGTATTCCTGCCCGT
ATCGGGTCCCGGACTGATTCCCTTCGCGGCGCAGAGCCAGGACAATGTGCCCAGCCTCGACCAGTTCACGCAGGAAATCC
GCATCGCCTCGAACAACAGCGGCGGGCTCGGTTACCAGTTCGGCGCCTTCTATTTCGACGAAGGGCTCGACATCACCAGC
TTCGATTTCGGCGGTCCGACCGACGCAGCCCCTGCGGCGATCGCGGTGCAGCGGCAGGACAGCGAAGCCTATGGCATCTT
CGGTTCGGTCAATTACGCCTTCGAGGGCGGCCTGACGCTTCAGGCCGGCGCGCGCTACAACCACGACACGCGCGATTTCG
TCGCGGCGCGCCCGGTCGAAACGCGCCCGATCTTCGTCGTCAATCCGAACACGCCGGTCCCGCCCCAAAGCGCGAGGGTC
AAGGGCAAGCTGCTGACATGGGACGCCAGCGCGACCTGGGAAGCGTCGGACGCCGTGACGTTCTACGCCCGCGTTGCGCG
CGGCTATCGCGCGCCGTCGGTGCAGGGCCGCCTGACCTTCTCGCGCGTGATTTCGACCGCCGATCAGGAAGAAACGATGT
CGTATGAGGCGGGGATCAAGACCGCCTTCCTCGACGACCGCGTCCGCTTCAACCTCACCGGCTATTATTTCGATACCAAG
GATCTTCAGCTGACCGCGGTCGGCGGCACGGCGAACGTCGCCAGCCTGCTCAACGTCGATGCCAAGGGCCATGGGATCGA
GGCCGAATTGCAGGCGGCGCCTGCGCGCGGGCTGACCTTCAGCGTGGGCGGCGCGTGGAACGTCGCCGAGATCGACGATG
CCAACGCTTTTGTCGCGGGCTGTGGTTCGGCGACGCCGTGCACGGTGCTCGACCCGCAGCGGCCGGGCAGCCCCGGCATC
TTCTCGATCGACGGCAACCAGCTGCCGCAGTCGCCCAAGTGGACGCTGAATGCGACCGCGGGTTATGAAATCCCCGTCGG
CGACGGCGCCATCTATGCCTTCACCGACTGGTATTACCGGTCGAAGGTGCAGTTCTTCCTCTATCAGTCGGTCGAGTTCT
CGGACGACAAGATGATCGAGGGCGGGCTGCGCGTCGGCTACCGCACCGACCGTTTCGACGTCGCGGCCTTTGTGCGCAAC
ATCACCAACGATGAATCGCCGACCGGCGGCATCGATTTCAACAACCTGACGAGCTATGTCAACGAACCCCGCATCTGGGG
CGTCGAGGCGGGCGTGAAGTTCTAA

Upstream 100 bases:

>100_bases
CGACGGCGGCGCGGCGCTCGGGCGTTGACCGTGCGGCGCGTGCGCGGCAACGGCGGGAAAATTGTCTACCTACCCGCTTC
ACTTTCGAAAAGGACAGGTC

Downstream 100 bases:

>100_bases
AGGCCCGGCAACCTCCCCGTCGCCCGGCGATGGGGAGGGGTGCCGCTTTGGGGTGGAGAGCGTCCCTCGATGATCCTCCC
CATCGACTTGCGATGGGGAG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Domain Protein; NB-Dependent Receptor Protein; NB Dependent Receptor; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Receptor; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; Transporter OMR Family; Helix-Turn-Helix AraC Type; Outer Membrane Receptor Family Protein; NB Dependent Receptor Protein; NB-Dependent Siderophore Receptor; NB-Dependent Siderophore Receptor Protein

Number of amino acids: Translated: 754; Mature: 754

Protein sequence:

>754_residues
MRHLPSALAMSVALAAAAVAPAAAQEASVVAAEEGSGLGDIVVTAQRREESLQDVPVSVSVLSGDTLGAITSTGADIRAL
AGRVPSLNIESSYGRSFPRFYIRGLGNTDFDLNASQPVSLVYDEVVLENPILKGFPIFDLDRVEVLRGPQGTLFGRNTPA
GIVKFDTVKPGKTGGYARASYGRYGTSQVEVAAGAADDNGFSVRLSGLYQHRDDWVDNIATTAKDDLGGYDDIAARLQLQ
YENGPFTGRVTGQVRVFDGSAIIFRANTQLPGSNRLVGLGGADTAFERDKVWQDGINFQKLNTYNAALNLEYDFGAVTAY
SITSYWNGNFKSRGDIDGGFGAVFLPVSGPGLIPFAAQSQDNVPSLDQFTQEIRIASNNSGGLGYQFGAFYFDEGLDITS
FDFGGPTDAAPAAIAVQRQDSEAYGIFGSVNYAFEGGLTLQAGARYNHDTRDFVAARPVETRPIFVVNPNTPVPPQSARV
KGKLLTWDASATWEASDAVTFYARVARGYRAPSVQGRLTFSRVISTADQEETMSYEAGIKTAFLDDRVRFNLTGYYFDTK
DLQLTAVGGTANVASLLNVDAKGHGIEAELQAAPARGLTFSVGGAWNVAEIDDANAFVAGCGSATPCTVLDPQRPGSPGI
FSIDGNQLPQSPKWTLNATAGYEIPVGDGAIYAFTDWYYRSKVQFFLYQSVEFSDDKMIEGGLRVGYRTDRFDVAAFVRN
ITNDESPTGGIDFNNLTSYVNEPRIWGVEAGVKF

Sequences:

>Translated_754_residues
MRHLPSALAMSVALAAAAVAPAAAQEASVVAAEEGSGLGDIVVTAQRREESLQDVPVSVSVLSGDTLGAITSTGADIRAL
AGRVPSLNIESSYGRSFPRFYIRGLGNTDFDLNASQPVSLVYDEVVLENPILKGFPIFDLDRVEVLRGPQGTLFGRNTPA
GIVKFDTVKPGKTGGYARASYGRYGTSQVEVAAGAADDNGFSVRLSGLYQHRDDWVDNIATTAKDDLGGYDDIAARLQLQ
YENGPFTGRVTGQVRVFDGSAIIFRANTQLPGSNRLVGLGGADTAFERDKVWQDGINFQKLNTYNAALNLEYDFGAVTAY
SITSYWNGNFKSRGDIDGGFGAVFLPVSGPGLIPFAAQSQDNVPSLDQFTQEIRIASNNSGGLGYQFGAFYFDEGLDITS
FDFGGPTDAAPAAIAVQRQDSEAYGIFGSVNYAFEGGLTLQAGARYNHDTRDFVAARPVETRPIFVVNPNTPVPPQSARV
KGKLLTWDASATWEASDAVTFYARVARGYRAPSVQGRLTFSRVISTADQEETMSYEAGIKTAFLDDRVRFNLTGYYFDTK
DLQLTAVGGTANVASLLNVDAKGHGIEAELQAAPARGLTFSVGGAWNVAEIDDANAFVAGCGSATPCTVLDPQRPGSPGI
FSIDGNQLPQSPKWTLNATAGYEIPVGDGAIYAFTDWYYRSKVQFFLYQSVEFSDDKMIEGGLRVGYRTDRFDVAAFVRN
ITNDESPTGGIDFNNLTSYVNEPRIWGVEAGVKF
>Mature_754_residues
MRHLPSALAMSVALAAAAVAPAAAQEASVVAAEEGSGLGDIVVTAQRREESLQDVPVSVSVLSGDTLGAITSTGADIRAL
AGRVPSLNIESSYGRSFPRFYIRGLGNTDFDLNASQPVSLVYDEVVLENPILKGFPIFDLDRVEVLRGPQGTLFGRNTPA
GIVKFDTVKPGKTGGYARASYGRYGTSQVEVAAGAADDNGFSVRLSGLYQHRDDWVDNIATTAKDDLGGYDDIAARLQLQ
YENGPFTGRVTGQVRVFDGSAIIFRANTQLPGSNRLVGLGGADTAFERDKVWQDGINFQKLNTYNAALNLEYDFGAVTAY
SITSYWNGNFKSRGDIDGGFGAVFLPVSGPGLIPFAAQSQDNVPSLDQFTQEIRIASNNSGGLGYQFGAFYFDEGLDITS
FDFGGPTDAAPAAIAVQRQDSEAYGIFGSVNYAFEGGLTLQAGARYNHDTRDFVAARPVETRPIFVVNPNTPVPPQSARV
KGKLLTWDASATWEASDAVTFYARVARGYRAPSVQGRLTFSRVISTADQEETMSYEAGIKTAFLDDRVRFNLTGYYFDTK
DLQLTAVGGTANVASLLNVDAKGHGIEAELQAAPARGLTFSVGGAWNVAEIDDANAFVAGCGSATPCTVLDPQRPGSPGI
FSIDGNQLPQSPKWTLNATAGYEIPVGDGAIYAFTDWYYRSKVQFFLYQSVEFSDDKMIEGGLRVGYRTDRFDVAAFVRN
ITNDESPTGGIDFNNLTSYVNEPRIWGVEAGVKF

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80880; Mature: 80880

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLPSALAMSVALAAAAVAPAAAQEASVVAAEEGSGLGDIVVTAQRREESLQDVPVSVS
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHCCCEEEE
VLSGDTLGAITSTGADIRALAGRVPSLNIESSYGRSFPRFYIRGLGNTDFDLNASQPVSL
EECCCCCEEEECCCCHHHHHHCCCCCCCCCHHCCCCCCEEHEEECCCCCCCCCCCCCHHH
VYDEVVLENPILKGFPIFDLDRVEVLRGPQGTLFGRNTPAGIVKFDTVKPGKTGGYARAS
HHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCEECCCCCCCEEEEECCCCCCCCCEEECC
YGRYGTSQVEVAAGAADDNGFSVRLSGLYQHRDDWVDNIATTAKDDLGGYDDIAARLQLQ
CCCCCCCEEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
YENGPFTGRVTGQVRVFDGSAIIFRANTQLPGSNRLVGLGGADTAFERDKVWQDGINFQK
ECCCCEEEEEEEEEEEEECCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHCCCCEEE
LNTYNAALNLEYDFGAVTAYSITSYWNGNFKSRGDIDGGFGAVFLPVSGPGLIPFAAQSQ
EEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCC
DNVPSLDQFTQEIRIASNNSGGLGYQFGAFYFDEGLDITSFDFGGPTDAAPAAIAVQRQD
CCCCCHHHHHHHEEEEECCCCCCCEEECEEEECCCCCEEEECCCCCCCCCCEEEEEEECC
SEAYGIFGSVNYAFEGGLTLQAGARYNHDTRDFVAARPVETRPIFVVNPNTPVPPQSARV
CCEEEEEEEEEEEEECCEEEEECCCCCCCCHHHEEECCCCCCCEEEECCCCCCCCCCCEE
KGKLLTWDASATWEASDAVTFYARVARGYRAPSVQGRLTFSRVISTADQEETMSYEAGIK
EEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCHHHHHHHHCCCE
TAFLDDRVRFNLTGYYFDTKDLQLTAVGGTANVASLLNVDAKGHGIEAELQAAPARGLTF
EEEECCCEEEEEEEEEEECCCEEEEEECCCCCHHHHEECCCCCCCCEEEEECCCCCCCEE
SVGGAWNVAEIDDANAFVAGCGSATPCTVLDPQRPGSPGIFSIDGNQLPQSPKWTLNATA
ECCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCEEEEECC
GYEIPVGDGAIYAFTDWYYRSKVQFFLYQSVEFSDDKMIEGGLRVGYRTDRFDVAAFVRN
CEEEECCCCEEEEEECCEECCEEEEEEEEEECCCCCCEEECCEEECEECCCHHHHHHHHH
ITNDESPTGGIDFNNLTSYVNEPRIWGVEAGVKF
HCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure
MRHLPSALAMSVALAAAAVAPAAAQEASVVAAEEGSGLGDIVVTAQRREESLQDVPVSVS
CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHHCCCEEEE
VLSGDTLGAITSTGADIRALAGRVPSLNIESSYGRSFPRFYIRGLGNTDFDLNASQPVSL
EECCCCCEEEECCCCHHHHHHCCCCCCCCCHHCCCCCCEEHEEECCCCCCCCCCCCCHHH
VYDEVVLENPILKGFPIFDLDRVEVLRGPQGTLFGRNTPAGIVKFDTVKPGKTGGYARAS
HHHHHHHCCCCCCCCCCCCCCHHHEEECCCCCEECCCCCCCEEEEECCCCCCCCCEEECC
YGRYGTSQVEVAAGAADDNGFSVRLSGLYQHRDDWVDNIATTAKDDLGGYDDIAARLQLQ
CCCCCCCEEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
YENGPFTGRVTGQVRVFDGSAIIFRANTQLPGSNRLVGLGGADTAFERDKVWQDGINFQK
ECCCCEEEEEEEEEEEEECCEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHCCCCEEE
LNTYNAALNLEYDFGAVTAYSITSYWNGNFKSRGDIDGGFGAVFLPVSGPGLIPFAAQSQ
EEEEEEEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCC
DNVPSLDQFTQEIRIASNNSGGLGYQFGAFYFDEGLDITSFDFGGPTDAAPAAIAVQRQD
CCCCCHHHHHHHEEEEECCCCCCCEEECEEEECCCCCEEEECCCCCCCCCCEEEEEEECC
SEAYGIFGSVNYAFEGGLTLQAGARYNHDTRDFVAARPVETRPIFVVNPNTPVPPQSARV
CCEEEEEEEEEEEEECCEEEEECCCCCCCCHHHEEECCCCCCCEEEECCCCCCCCCCCEE
KGKLLTWDASATWEASDAVTFYARVARGYRAPSVQGRLTFSRVISTADQEETMSYEAGIK
EEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEHHHHHHCCCHHHHHHHHCCCE
TAFLDDRVRFNLTGYYFDTKDLQLTAVGGTANVASLLNVDAKGHGIEAELQAAPARGLTF
EEEECCCEEEEEEEEEEECCCEEEEEECCCCCHHHHEECCCCCCCCEEEEECCCCCCCEE
SVGGAWNVAEIDDANAFVAGCGSATPCTVLDPQRPGSPGIFSIDGNQLPQSPKWTLNATA
ECCCCEEEEEECCCCEEEEECCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCEEEEECC
GYEIPVGDGAIYAFTDWYYRSKVQFFLYQSVEFSDDKMIEGGLRVGYRTDRFDVAAFVRN
CEEEECCCCEEEEEECCEECCEEEEEEEEEECCCCCCEEECCEEECEECCCHHHHHHHHH
ITNDESPTGGIDFNNLTSYVNEPRIWGVEAGVKF
HCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA