Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082790

Identifier: 99082790

GI number: 99082790

Start: 3118616

End: 3119233

Strand: Direct

Name: 99082790

Synonym: TM1040_2950

Alternate gene names: NA

Gene position: 3118616-3119233 (Clockwise)

Preceding gene: 99082789

Following gene: 99082791

Centisome position: 97.43

GC content: 58.09

Gene sequence:

>618_bases
ATGGCGAAGGCGAACAAGTCTCAAAAGATGGAAAAAGCGCGGCGCGGCACTTTGATGCTGTTGGCTGTTTTCCTGATGGG
CTCTGCGGTGGTGCGAATCGCACTCGAAGCGGCTCCGGCGATTGCGCGGGAGGTTGCAGATATCAAATCGGATGAAGCGC
CTGTCGAAAAACCGGTGGCTGCGACGGGTCTCGCTTCGGTGCCCGATTCCGCAGAGATGCAAGCCATGCTTGCTGCGTTC
CAAAAGCGCGAAGAAAAACTGGCGGCTCGTGAAGCTGAGGTGGAAGATCGGATGCGGGCCCTGGAGATCGCCGATCAGGC
CATCGATAAAAAGCTGCAGGATCTTGAGGAGGCTGAGCAAAAGTTGCTGGCCACTCTGGCGCTGGCTGACGGCGCTGCCG
AGCAGGACGTCACCACGCTGACAACAGTCTATGAACAGATGAAGCCTAAGGATGCTTCTGCTCTGTTTGAAGAAATGGAC
CCTACGTTTGCAGCCGGGTTTCTTGCACGCATGAAACCGGAAGCCGCGGCGGGTATCATGGCAGGGCTGAGCCCCGAGGC
TGCATACACGATCAGTGTCGTGCTTGCGGGACGCAACGGCGAGGTGCCCAAGGAGTAA

Upstream 100 bases:

>100_bases
CTCAGGCTGAAGCTGCAGAGCAGGCCGACGCGCAGGAAGAGGCCAAACCGGCTGGCCTGATGTTTGTTCGGCATAGCCGC
AGTCAGAATCGGGTGGCGTG

Downstream 100 bases:

>100_bases
CTTGGGCCCTCACTCAGTCTTTTTTAACAAGACTGCATTACTCTTGAGACAGTGACGGAATTTGGAGCTTACCTATGATC
GGGATTGTAGGGATCATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MAKANKSQKMEKARRGTLMLLAVFLMGSAVVRIALEAAPAIAREVADIKSDEAPVEKPVAATGLASVPDSAEMQAMLAAF
QKREEKLAAREAEVEDRMRALEIADQAIDKKLQDLEEAEQKLLATLALADGAAEQDVTTLTTVYEQMKPKDASALFEEMD
PTFAAGFLARMKPEAAAGIMAGLSPEAAYTISVVLAGRNGEVPKE

Sequences:

>Translated_205_residues
MAKANKSQKMEKARRGTLMLLAVFLMGSAVVRIALEAAPAIAREVADIKSDEAPVEKPVAATGLASVPDSAEMQAMLAAF
QKREEKLAAREAEVEDRMRALEIADQAIDKKLQDLEEAEQKLLATLALADGAAEQDVTTLTTVYEQMKPKDASALFEEMD
PTFAAGFLARMKPEAAAGIMAGLSPEAAYTISVVLAGRNGEVPKE
>Mature_204_residues
AKANKSQKMEKARRGTLMLLAVFLMGSAVVRIALEAAPAIAREVADIKSDEAPVEKPVAATGLASVPDSAEMQAMLAAFQ
KREEKLAAREAEVEDRMRALEIADQAIDKKLQDLEEAEQKLLATLALADGAAEQDVTTLTTVYEQMKPKDASALFEEMDP
TFAAGFLARMKPEAAAGIMAGLSPEAAYTISVVLAGRNGEVPKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21891; Mature: 21760

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKANKSQKMEKARRGTLMLLAVFLMGSAVVRIALEAAPAIAREVADIKSDEAPVEKPVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ATGLASVPDSAEMQAMLAAFQKREEKLAAREAEVEDRMRALEIADQAIDKKLQDLEEAEQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLATLALADGAAEQDVTTLTTVYEQMKPKDASALFEEMDPTFAAGFLARMKPEAAAGIM
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHCHHHHHHHH
AGLSPEAAYTISVVLAGRNGEVPKE
HCCCCCCEEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
AKANKSQKMEKARRGTLMLLAVFLMGSAVVRIALEAAPAIAREVADIKSDEAPVEKPVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
ATGLASVPDSAEMQAMLAAFQKREEKLAAREAEVEDRMRALEIADQAIDKKLQDLEEAEQ
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLLATLALADGAAEQDVTTLTTVYEQMKPKDASALFEEMDPTFAAGFLARMKPEAAAGIM
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHHCHHHHHHHH
AGLSPEAAYTISVVLAGRNGEVPKE
HCCCCCCEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA