| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is flgK [C]
Identifier: 99082780
GI number: 99082780
Start: 3110129
End: 3111577
Strand: Direct
Name: flgK [C]
Synonym: TM1040_2940
Alternate gene names: 99082780
Gene position: 3110129-3111577 (Clockwise)
Preceding gene: 99082779
Following gene: 99082781
Centisome position: 97.16
GC content: 57.07
Gene sequence:
>1449_bases ATGTCTCTATCGACTGCCCTTAGCAGCGCAATGACCGGTATCACAGCCGCGAGCCGGTCGACGTCGGTGATCTCCGACAA CCTCGCGAATGCCCTGAGCGAAGGGTATTATCGCCGCACTCTGGATCTCAGCTCCAACGGCGCGGCGGGTGGTGTGCGGA TCGGTTCCGTACAGCGCATGATTGACCCGGCCATTCAAAAGAGCGTTCGCTCCGCAGAAGCCAACTACGCTGCCACTTCG GTGACAGCGGGGTTCTACGCACGCGTTTCTGAGCAGGTCGGCACGGTCAATGATGCCTACTCGATCGCTCAGCGCATGAC CGACATGGAAACCGCACTGATCGAGGCGACATCGCTGCCAGACTCGGATGCACGCCTCAACGATTTGTCGATGCAGGCGG GGGAATTGGCGATGTCCATTCGCGATGCTGCCGAGGGTGTGTCGAGCCTGCGCAACAAAGCAGAGGACTCAATCGCTGCG CTTGTTCAGGGGCTGGAGACCAATCTCGAGACCTTGAACGACCTCAACAGAAAGATCCTCGCGGCAGAGGTACGCGGTCA GGATCCTTCGGGTCTCGAAGATCAGCGTGACAGTCTTATTGACGCGATCAACGAGGTGATCCCGGTTCAGGTGCACAAGC GCGACAACAATCAGACTGCGCTCTATACCAACTCCGGCATCAAGCTCATTGATGGTGGCTCTGTTGCGGAGTTCTCTTTT GATGAGACGCGCCTCGTGACCCCATATATGACGCTTGGAAACGGGCAGCTCTCGGGCCTTGAGATCGACGGCAAGCAGAT CGATACCTCAATCAATGGCAAGATCGGCGGTGGCAGTCTTGCGGCTCAGTTCCATGTGCGCGACGTGGCCTCGGTGCAGG CCCAAGAGGATCTCGACACCATGGCCGCGGATCTGATCCAGCGGTTCCAGGACCCGGCAGTTGACCCAACGCTTGGTGCA ACCGATCCGGGGATCTTTACCGATCAGGGCGCCTTCTTTGATCCGGTGAATACCTTAGGGGTGGCCAATCGGATCGAGCT GAATTCGATCATTTCCATGAGCGGCAGTGCTGAAACCTGGCGCTTGCGGGACGGTTTGAATGCGACTGCAATCGGTGAAC GTGGGGATACCACTATTCTCAACAATTACGCCGAGGCGATGGAAGCCACCAATACGATCACCTCTCCGGGGCTCGGGTCT GGCGATTACAGTGCCTATGCTATTGCCGCCAATCTGATGACCAACTTTACGCAGGAAAACACCTGGGCGGAACAGGAACT GGCGTATTCGTCTGCGATCTTCAGCGACATTCAGTCGCGAGAGCTGGAGCAAGGCGTCGACACCGACTCTGAGCTGCAAA CCCTTATGATGGTTGAGACAATCTATGCTGCGAACGCTCGGATGATCCAGGCGATCGACGAAATGATGCAGGAATTGATG AGGCTGTAA
Upstream 100 bases:
>100_bases TCAGACTGTGGATGAGATGCTTCAGGAAACGACCAACATTAAGCGCTGATAAAATCAGCGCTTTCCACAGCTAGAACTTA GTCACAGAAGGTGATTTGGG
Downstream 100 bases:
>100_bases GCAATGCATGTACAATCTTTTGGAGACATGGCGCAATATCTCTTCCTGCGTCGCCGCTCGGTCGAGCTGAACTCGACCCT TGATACGCTCACTCAGGAAA
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: Flagellar Hook-Associated Protein; Lateral Flagellar Hook-Associated Protein; Flagellar Hook-Associated FlgK
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MSLSTALSSAMTGITAASRSTSVISDNLANALSEGYYRRTLDLSSNGAAGGVRIGSVQRMIDPAIQKSVRSAEANYAATS VTAGFYARVSEQVGTVNDAYSIAQRMTDMETALIEATSLPDSDARLNDLSMQAGELAMSIRDAAEGVSSLRNKAEDSIAA LVQGLETNLETLNDLNRKILAAEVRGQDPSGLEDQRDSLIDAINEVIPVQVHKRDNNQTALYTNSGIKLIDGGSVAEFSF DETRLVTPYMTLGNGQLSGLEIDGKQIDTSINGKIGGGSLAAQFHVRDVASVQAQEDLDTMAADLIQRFQDPAVDPTLGA TDPGIFTDQGAFFDPVNTLGVANRIELNSIISMSGSAETWRLRDGLNATAIGERGDTTILNNYAEAMEATNTITSPGLGS GDYSAYAIAANLMTNFTQENTWAEQELAYSSAIFSDIQSRELEQGVDTDSELQTLMMVETIYAANARMIQAIDEMMQELM RL
Sequences:
>Translated_482_residues MSLSTALSSAMTGITAASRSTSVISDNLANALSEGYYRRTLDLSSNGAAGGVRIGSVQRMIDPAIQKSVRSAEANYAATS VTAGFYARVSEQVGTVNDAYSIAQRMTDMETALIEATSLPDSDARLNDLSMQAGELAMSIRDAAEGVSSLRNKAEDSIAA LVQGLETNLETLNDLNRKILAAEVRGQDPSGLEDQRDSLIDAINEVIPVQVHKRDNNQTALYTNSGIKLIDGGSVAEFSF DETRLVTPYMTLGNGQLSGLEIDGKQIDTSINGKIGGGSLAAQFHVRDVASVQAQEDLDTMAADLIQRFQDPAVDPTLGA TDPGIFTDQGAFFDPVNTLGVANRIELNSIISMSGSAETWRLRDGLNATAIGERGDTTILNNYAEAMEATNTITSPGLGS GDYSAYAIAANLMTNFTQENTWAEQELAYSSAIFSDIQSRELEQGVDTDSELQTLMMVETIYAANARMIQAIDEMMQELM RL >Mature_481_residues SLSTALSSAMTGITAASRSTSVISDNLANALSEGYYRRTLDLSSNGAAGGVRIGSVQRMIDPAIQKSVRSAEANYAATSV TAGFYARVSEQVGTVNDAYSIAQRMTDMETALIEATSLPDSDARLNDLSMQAGELAMSIRDAAEGVSSLRNKAEDSIAAL VQGLETNLETLNDLNRKILAAEVRGQDPSGLEDQRDSLIDAINEVIPVQVHKRDNNQTALYTNSGIKLIDGGSVAEFSFD ETRLVTPYMTLGNGQLSGLEIDGKQIDTSINGKIGGGSLAAQFHVRDVASVQAQEDLDTMAADLIQRFQDPAVDPTLGAT DPGIFTDQGAFFDPVNTLGVANRIELNSIISMSGSAETWRLRDGLNATAIGERGDTTILNNYAEAMEATNTITSPGLGSG DYSAYAIAANLMTNFTQENTWAEQELAYSSAIFSDIQSRELEQGVDTDSELQTLMMVETIYAANARMIQAIDEMMQELMR L
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787323, Length=295, Percent_Identity=25.0847457627119, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51546; Mature: 51415
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSTALSSAMTGITAASRSTSVISDNLANALSEGYYRRTLDLSSNGAAGGVRIGSVQRM CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEHHHHHH IDPAIQKSVRSAEANYAATSVTAGFYARVSEQVGTVNDAYSIAQRMTDMETALIEATSLP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC DSDARLNDLSMQAGELAMSIRDAAEGVSSLRNKAEDSIAALVQGLETNLETLNDLNRKIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AAEVRGQDPSGLEDQRDSLIDAINEVIPVQVHKRDNNQTALYTNSGIKLIDGGSVAEFSF EHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCEEEEECCCEEEECC DETRLVTPYMTLGNGQLSGLEIDGKQIDTSINGKIGGGSLAAQFHVRDVASVQAQEDLDT CCCEEEECEEEECCCCCCCEEECCCEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH MAADLIQRFQDPAVDPTLGATDPGIFTDQGAFFDPVNTLGVANRIELNSIISMSGSAETW HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEHHHHHCCCCCCCEE RLRDGLNATAIGERGDTTILNNYAEAMEATNTITSPGLGSGDYSAYAIAANLMTNFTQEN EECCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC TWAEQELAYSSAIFSDIQSRELEQGVDTDSELQTLMMVETIYAANARMIQAIDEMMQELM CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RL CC >Mature Secondary Structure SLSTALSSAMTGITAASRSTSVISDNLANALSEGYYRRTLDLSSNGAAGGVRIGSVQRM CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEHHHHHH IDPAIQKSVRSAEANYAATSVTAGFYARVSEQVGTVNDAYSIAQRMTDMETALIEATSLP HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC DSDARLNDLSMQAGELAMSIRDAAEGVSSLRNKAEDSIAALVQGLETNLETLNDLNRKIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE AAEVRGQDPSGLEDQRDSLIDAINEVIPVQVHKRDNNQTALYTNSGIKLIDGGSVAEFSF EHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCCEEEEECCCEEEECC DETRLVTPYMTLGNGQLSGLEIDGKQIDTSINGKIGGGSLAAQFHVRDVASVQAQEDLDT CCCEEEECEEEECCCCCCCEEECCCEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHH MAADLIQRFQDPAVDPTLGATDPGIFTDQGAFFDPVNTLGVANRIELNSIISMSGSAETW HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEHHHHHCCCCCCCEE RLRDGLNATAIGERGDTTILNNYAEAMEATNTITSPGLGSGDYSAYAIAANLMTNFTQEN EECCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC TWAEQELAYSSAIFSDIQSRELEQGVDTDSELQTLMMVETIYAANARMIQAIDEMMQELM CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RL CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA