| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is parA [H]
Identifier: 99082707
GI number: 99082707
Start: 3036499
End: 3037311
Strand: Direct
Name: parA [H]
Synonym: TM1040_2867
Alternate gene names: 99082707
Gene position: 3036499-3037311 (Clockwise)
Preceding gene: 99082706
Following gene: 99082708
Centisome position: 94.86
GC content: 50.92
Gene sequence:
>813_bases GTGTCTGACTTTTCCCGTTTTGGAGTCCCCCGGATCATTGCGATCGCTAACCAAAAGGGGGGCGTGGGAAAAACGACTAC TGCGATTAACCTCGCCGCCGCTTTGGTAGAGGAGGGGATGCGTGTTTTGCTGGTTGATCTCGATCCCCAAGGGAACGCGT CGACAGGACTGGGCGTCGAAGTTGATGACAGAGAGCACACGACTTATGATCTGCTGGTTGAGGAAGCAGAACTCTCACAG GTGATCCGCGAGACAGATCTAGAGGATCTTTGCATTGTCCCGGCAAACGTAGATCTAAGCTCTGCTGACATCGAGTTATT TTCTAACGAAAAACGGAGCTTTCTTCTCCACGACGCCCTGCGTCAACCAGCTATGACGGAATATGATTGGGACTATATCC TGATTGATTGCCCGCCGTCGCTCAATCTCCTGACTGTGAACGCAATGGTTGCCGCACATTCAGTGCTGATTCCGCTACAG AGTGAGTTCTTTGCTCTCGAAGGTTTGTCCCAACTCATGCTCACGATCCGTGAGGTCCGACAAGCTGCTAATCCTCAGTT GCGCATCGAAGGTGTCGTTTTGACGATGTATGATCGTCGAAATAACCTGTCCCAGCAGGTTGAACAGGATGCACGGGATA ATCTCGGGGATCTCGTGTTTCGGACAAAGATCCCAAGAAATGTGCGGGTAAGCGAGTCACCATCCTACGCGATGCCGGTA CTGAATTACGATCCAAGCTCTCTTGGAGCAAAAGCTTATCGTCAATTAGCTGGTGAGATTATTGCCAACCACCAAGACAT CGCGGCACAATAA
Upstream 100 bases:
>100_bases GAGGTGGATAACGCGCGCAAGAGATGGCGGTTTGAGTGCGATGAGATTACAAGTGTAACTGAGCCTGGTGCTGTCATCCT CAAGATAAAGGGAGTAGAGC
Downstream 100 bases:
>100_bases GAAAAAGAGGGGCGAACAATGGCAGATAAAAAGACTAAACCGCGTGGCTTGGGTCGTGGCTTGTCGGCGTTGATGGCAGA CGTAAATGCGGATCCGGTGA
Product: chromosome segregation ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVEVDDREHTTYDLLVEEAELSQ VIRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDALRQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQ SEFFALEGLSQLMLTIREVRQAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPV LNYDPSSLGAKAYRQLAGEIIANHQDIAAQ
Sequences:
>Translated_270_residues MSDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVEVDDREHTTYDLLVEEAELSQ VIRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDALRQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQ SEFFALEGLSQLMLTIREVRQAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPV LNYDPSSLGAKAYRQLAGEIIANHQDIAAQ >Mature_269_residues SDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVEVDDREHTTYDLLVEEAELSQV IRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDALRQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQS EFFALEGLSQLMLTIREVRQAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPVL NYDPSSLGAKAYRQLAGEIIANHQDIAAQ
Specific function: Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 29867; Mature: 29736
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVE CCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEE VDDREHTTYDLLVEEAELSQVIRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDAL ECCCCCCCHHHEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHH RQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQSEFFALEGLSQLMLTIREVR CCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHH QAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPV HHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHEEEEECCCCCEEECCCCCCCCCE LNYDPSSLGAKAYRQLAGEIIANHQDIAAQ ECCCCHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SDFSRFGVPRIIAIANQKGGVGKTTTAINLAAALVEEGMRVLLVDLDPQGNASTGLGVE CCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEE VDDREHTTYDLLVEEAELSQVIRETDLEDLCIVPANVDLSSADIELFSNEKRSFLLHDAL ECCCCCCCHHHEECHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHHH RQPAMTEYDWDYILIDCPPSLNLLTVNAMVAAHSVLIPLQSEFFALEGLSQLMLTIREVR CCCCCCCCCCCEEEEECCCCCCEEEEHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHH QAANPQLRIEGVVLTMYDRRNNLSQQVEQDARDNLGDLVFRTKIPRNVRVSESPSYAMPV HHCCCCEEEEEEEEEEECCCCCHHHHHHHHHHCCHHHEEEEECCCCCEEECCCCCCCCCE LNYDPSSLGAKAYRQLAGEIIANHQDIAAQ ECCCCHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9054507 [H]