Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082603

Identifier: 99082603

GI number: 99082603

Start: 2910088

End: 2910621

Strand: Reverse

Name: 99082603

Synonym: TM1040_2763

Alternate gene names: NA

Gene position: 2910621-2910088 (Counterclockwise)

Preceding gene: 99082605

Following gene: 99082600

Centisome position: 90.93

GC content: 54.87

Gene sequence:

>534_bases
ATGTTCTTATCCGCCTTATCTCCGATCCGTCGCGTCACTGCAATCACTCTGCTCGGCCTGAGCGGTCTCTTGATTACATC
CTGCCAACGCGAAGCCTCAAGTTCCGAGGCGGCAGCTTTCTTGTCTGGTTGCACCTCGAACCCGGGTCGGAGTGACCACT
GTACACCGCTTTTGGCCTGTTTCGAAAATGGGCAAAGCATCCGTGGGGCGACGTTTGGATGGTTGTCGGGCAATATCGAG
GGAAAGACCCAAGATGGCGTAGCGTGCCGCGGAAAATGGGAGATTTTAAGTACAGCAGATGCCAGTGGTTCTGCTCAATT
TATCTGCGAGGACGGCAGCTATGGAAACGCAAGTTTTTCCTATGATCGCGCGAAGCCCGGCACGATTTGGGGGAGAGGTG
AATTAAATGCGTCCGAGGCGTTTCAGGTCTGGGGCGGTTGGGACCTCATTCAGCGGCTGCAATCGGCAGGGGGCCATTTT
GATCAGCTATGTGATGCTTTGAATGGCCTGAAAGAGCGCCGATCCGCACTGTGA

Upstream 100 bases:

>100_bases
CGCGAAAGATGAAGGCGGAGCCATCGATCAGGTGGAGGTGACAGCCTTTGCCAAAATTGCTAGTGCTCATGGTGTTTGAC
CCCAACTGATTGTTTCCCAG

Downstream 100 bases:

>100_bases
TATATTGCACGCATGCATCGTTGTGGCCTTCAGGTAGGGTATTGGCCCATCTGTCAGTTCGACAGATTTAGAACATTCCC
ATCACAAGGCCTGCTGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLACFENGQSIRGATFGWLSGNIE
GKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFSYDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHF
DQLCDALNGLKERRSAL

Sequences:

>Translated_177_residues
MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLACFENGQSIRGATFGWLSGNIE
GKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFSYDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHF
DQLCDALNGLKERRSAL
>Mature_177_residues
MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLACFENGQSIRGATFGWLSGNIE
GKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFSYDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHF
DQLCDALNGLKERRSAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18802; Mature: 18802

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLAC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
FENGQSIRGATFGWLSGNIEGKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFS
HHCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCC
YDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHFDQLCDALNGLKERRSAL
CCCCCCCCEECCCCCCHHHHEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFLSALSPIRRVTAITLLGLSGLLITSCQREASSSEAAAFLSGCTSNPGRSDHCTPLLAC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
FENGQSIRGATFGWLSGNIEGKTQDGVACRGKWEILSTADASGSAQFICEDGSYGNASFS
HHCCCCCCCCEEEEECCCCCCCCCCCEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCC
YDRAKPGTIWGRGELNASEAFQVWGGWDLIQRLQSAGGHFDQLCDALNGLKERRSAL
CCCCCCCCEECCCCCCHHHHEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA