| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082602
Identifier: 99082602
GI number: 99082602
Start: 2909535
End: 2910020
Strand: Direct
Name: 99082602
Synonym: TM1040_2762
Alternate gene names: NA
Gene position: 2909535-2910020 (Clockwise)
Preceding gene: 99082601
Following gene: 99082604
Centisome position: 90.9
GC content: 63.58
Gene sequence:
>486_bases ATGGCAGAGCTGTTGATCATATATCATTCCCGCACCGGCGGCAGCCGGCAGATGGCCGAGGCCGCTTATGCGGGCGCTTC GAGCGAGGGGTCCGCGCGTCTGGTCCACGCCGAGGAGGCCGGGCCGGAGGATTTGCGGGCGGCAAGCGGCTATCTGTTCT GCGCGCCAGAAAACCTCGCGGCGCTGTCTGGTGCGATGAAGGAGTTCTTTGACCGCTGTTACTATCCCGTTCTGGGTCAG CTAGAGGGCCGCGCGTATGCGCAGATGATCTGCGCCGGATCGGATGGCGAGAGCGCCGCGCGGCAACTGGCACGGATCGC TCAGGGCTGGCGGCTGAAGCCGGTGCAGGAACCGCTGATTATCTGCACCCACGCACAGACTCCGGAGGCGATTCTGGCCG ACAAGGTCATCCCCGAGGAAGAATTGCAGATGTGCCGCGGCTTAGGTCAGGCCATGGCAGCAGGCCTTGTGATGGGAATG TTCTAA
Upstream 100 bases:
>100_bases GCGATTGCAAATACATCCACCGGGATTTTGAAGGCAAAGTCGCCTAAGCCAGGCCTGCCTGCGCTTTTGATCCGCACCCG GGTTCGTTAGTCTGCCGGAC
Downstream 100 bases:
>100_bases ATCTGTCGAACTGACAGATGGGCCAATACCCTACCTGAAGGCCACAACGATGCATGCGTGCAATATATCACAGTGCGGAT CGGCGCTCTTTCAGGCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: Multimeric Flavodoxin WrbA; Flavodoxin/Nitric Oxide Synthase; NAD(P)H DehydrogenaseNADPH-Dependent FMN Reductase; NAD(P)H Dehydrogenase; NADPH-Dependent FMN Reductase; Oxidoreductase; Flavoprotein
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MAELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLAALSGAMKEFFDRCYYPVLGQ LEGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLIICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGM F
Sequences:
>Translated_161_residues MAELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLAALSGAMKEFFDRCYYPVLGQ LEGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLIICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGM F >Mature_160_residues AELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLAALSGAMKEFFDRCYYPVLGQL EGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLIICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGMF
Specific function: Unknown
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17241; Mature: 17110
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLA CCEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCEEEECCCHHH ALSGAMKEFFDRCYYPVLGQLEGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLI HHHHHHHHHHHHCCHHHHHCCCCHHEEHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEE ICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGMF EEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AELLIIYHSRTGGSRQMAEAAYAGASSEGSARLVHAEEAGPEDLRAASGYLFCAPENLA CEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHCCEEEECCCHHH ALSGAMKEFFDRCYYPVLGQLEGRAYAQMICAGSDGESAARQLARIAQGWRLKPVQEPLI HHHHHHHHHHHHCCHHHHHCCCCHHEEHEEECCCCCHHHHHHHHHHHCCCCCCCCCCCEE ICTHAQTPEAILADKVIPEEELQMCRGLGQAMAAGLVMGMF EEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA