| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is fgs [H]
Identifier: 99082515
GI number: 99082515
Start: 2810634
End: 2811905
Strand: Reverse
Name: fgs [H]
Synonym: TM1040_2675
Alternate gene names: 99082515
Gene position: 2811905-2810634 (Counterclockwise)
Preceding gene: 99082516
Following gene: 99082512
Centisome position: 87.85
GC content: 65.88
Gene sequence:
>1272_bases ATGACCGAACAGACCTCCGATGCCATTCTCGCCCGCATGATGGCGCTGCACCCCAAGATCATCGACCTGACGCTGGATCG GGTCTGGCGTCTTCTGGCGGCGCTTGAGAACCCGCAGGACAAGCTGCCCCCGGTGATCCATATCGCGGGCACCAACGGCA AAGGCTCGACGCAGGCGATGATCCGCGCCGGGCTTGAGGGCTGGGGCAAATCGGTGCACGCCTATACCTCACCGCATCTG GCGCGCTTTCATGAACGCATCCGTCTGGCGGGCGATCTGATCTCAGAGGCGCATCTCACGGAGGTGCTGGACGAGTGCTA CAGCGCCAATGGCGACGCAAGCATCACCTATTTCGAGATCACCACCGTCGCGGGGCTTCTGGCGTTTTCACGCACACCCG CCGACTACACCCTCCTCGAGGTTGGCCTTGGCGGGCGTCTGGATGCCACCAATGTCATCACGCCCGAGGTCTCTGTAATC ACGCCGGTCTCGATCGATCACGAGCAATTCCTCGGCAATACGCTGGCCAAGATCGCAGGCGAGAAGGCCGGGATCATCAA ACGCGGCGTGCCCGTGGTGGTCGGCCCCCAGGCCGAAGAGGCGATGGAGGTCATCGAGGACACCGCGATGCGCCTGGGCG CCCCCCTGATCGCCTATGGCCAGCACTGGCACGTCCACGAGGAACGCGGCCGTCTCGTCTATCAGGACGAGCGCGGCCTG CTGGACCTGCCGCTGCCCAACCTGATGGGCGCGCATCAGATCCAGAACGCCGGCGCCGCCCTTGCGGTGCTGCGCCACCT TGGCGCGGATGAGGCCGCCTGCGAGGCGGCTGTTGTGGGGGCACAGTGGCCCGCCCGTATGCAGCGCCTCAAAACCGGCC CGCTGGTGGAAATCGCAGGCGCGGCCGAGCTGTGGCTCGATGGCGGCCACAACGCCGCTGCCGGGATTGCTCTCGCCGAT GTGCTGGCCAAGCTGCCCAAACGCCCGACGCATCTGATTTGCGGTATGCTCAATACCAAGGATGTCACAGGCTACCTGCG CCCGCTCGCCGCCGAGGCCCAGAGCCTCACGGCGGTGTCGATCCCGGGCGAGGCGGCAACCCTCTCGGCCGAGGAAACCA AAGCGGCGGCCAGTTCCGTGGACCTTCCAGCAACCACTGCGGAGTCTGTTGCCGAGGCGCTCACCGCCATTCTGGCGCGC GACCCAGACAGCCGCGTGCTGATCTGCGGCTCGCTCTATCTGGCGGGCAATATCCTGCGCGAGAACGGCTAG
Upstream 100 bases:
>100_bases CCAAACGGGGCGGGCGCTTCGCTTTCACCCCGACGGGACGGGCGCGGCCCTATCGCATGTGGCCCCGTGTCGCTCCGTGA TCAGACAGGTTCAGGCCGCC
Downstream 100 bases:
>100_bases GGCGCTTCCGATATCAGCACCAAGGCCCCCGCGCAGAGCCCAGCAGCGAGGGCTTTTGGGGGCGGCGCATTTGTGACGAC ATAATCGGGATCGTGGAGCC
Product: FolC bifunctional protein
Products: NA
Alternate protein names: Folylpoly-gamma-glutamate synthetase; FPGS; Tetrahydrofolylpolyglutamate synthase; Tetrahydrofolate synthase [H]
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTEQTSDAILARMMALHPKIIDLTLDRVWRLLAALENPQDKLPPVIHIAGTNGKGSTQAMIRAGLEGWGKSVHAYTSPHL ARFHERIRLAGDLISEAHLTEVLDECYSANGDASITYFEITTVAGLLAFSRTPADYTLLEVGLGGRLDATNVITPEVSVI TPVSIDHEQFLGNTLAKIAGEKAGIIKRGVPVVVGPQAEEAMEVIEDTAMRLGAPLIAYGQHWHVHEERGRLVYQDERGL LDLPLPNLMGAHQIQNAGAALAVLRHLGADEAACEAAVVGAQWPARMQRLKTGPLVEIAGAAELWLDGGHNAAAGIALAD VLAKLPKRPTHLICGMLNTKDVTGYLRPLAAEAQSLTAVSIPGEAATLSAEETKAAASSVDLPATTAESVAEALTAILAR DPDSRVLICGSLYLAGNILRENG
Sequences:
>Translated_423_residues MTEQTSDAILARMMALHPKIIDLTLDRVWRLLAALENPQDKLPPVIHIAGTNGKGSTQAMIRAGLEGWGKSVHAYTSPHL ARFHERIRLAGDLISEAHLTEVLDECYSANGDASITYFEITTVAGLLAFSRTPADYTLLEVGLGGRLDATNVITPEVSVI TPVSIDHEQFLGNTLAKIAGEKAGIIKRGVPVVVGPQAEEAMEVIEDTAMRLGAPLIAYGQHWHVHEERGRLVYQDERGL LDLPLPNLMGAHQIQNAGAALAVLRHLGADEAACEAAVVGAQWPARMQRLKTGPLVEIAGAAELWLDGGHNAAAGIALAD VLAKLPKRPTHLICGMLNTKDVTGYLRPLAAEAQSLTAVSIPGEAATLSAEETKAAASSVDLPATTAESVAEALTAILAR DPDSRVLICGSLYLAGNILRENG >Mature_422_residues TEQTSDAILARMMALHPKIIDLTLDRVWRLLAALENPQDKLPPVIHIAGTNGKGSTQAMIRAGLEGWGKSVHAYTSPHLA RFHERIRLAGDLISEAHLTEVLDECYSANGDASITYFEITTVAGLLAFSRTPADYTLLEVGLGGRLDATNVITPEVSVIT PVSIDHEQFLGNTLAKIAGEKAGIIKRGVPVVVGPQAEEAMEVIEDTAMRLGAPLIAYGQHWHVHEERGRLVYQDERGLL DLPLPNLMGAHQIQNAGAALAVLRHLGADEAACEAAVVGAQWPARMQRLKTGPLVEIAGAAELWLDGGHNAAAGIALADV LAKLPKRPTHLICGMLNTKDVTGYLRPLAAEAQSLTAVSIPGEAATLSAEETKAAASSVDLPATTAESVAEALTAILARD PDSRVLICGSLYLAGNILRENG
Specific function: Conversion of folates to polyglutamate derivatives. It preferes 5,10-methylenetetrahydrofolate, rather than 10- formyltetrahydrofolate as folate substrate [H]
COG id: COG0285
COG function: function code H; Folylpolyglutamate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the folylpolyglutamate synthase family [H]
Homologues:
Organism=Homo sapiens, GI66932984, Length=309, Percent_Identity=30.7443365695793, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI66932990, Length=309, Percent_Identity=30.7443365695793, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1788654, Length=415, Percent_Identity=33.4939759036145, Blast_Score=176, Evalue=3e-45, Organism=Caenorhabditis elegans, GI71984923, Length=477, Percent_Identity=26.8343815513627, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17553148, Length=477, Percent_Identity=26.8343815513627, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17553150, Length=477, Percent_Identity=26.8343815513627, Blast_Score=132, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6323760, Length=423, Percent_Identity=30.2600472813239, Blast_Score=163, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6324815, Length=335, Percent_Identity=28.3582089552239, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6322718, Length=284, Percent_Identity=26.7605633802817, Blast_Score=86, Evalue=9e-18, Organism=Drosophila melanogaster, GI24641571, Length=425, Percent_Identity=26.5882352941176, Blast_Score=108, Evalue=5e-24, Organism=Drosophila melanogaster, GI24581568, Length=176, Percent_Identity=34.0909090909091, Blast_Score=91, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018109 - InterPro: IPR001645 - InterPro: IPR004101 - InterPro: IPR013221 [H]
Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.17 [H]
Molecular weight: Translated: 44855; Mature: 44724
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: PS01012 FOLYLPOLYGLU_SYNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQTSDAILARMMALHPKIIDLTLDRVWRLLAALENPQDKLPPVIHIAGTNGKGSTQAM CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCHHHHH IRAGLEGWGKSVHAYTSPHLARFHERIRLAGDLISEAHLTEVLDECYSANGDASITYFEI HHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEH TTVAGLLAFSRTPADYTLLEVGLGGRLDATNVITPEVSVITPVSIDHEQFLGNTLAKIAG HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC EKAGIIKRGVPVVVGPQAEEAMEVIEDTAMRLGAPLIAYGQHWHVHEERGRLVYQDERGL CCCCHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEECCCEEEEECCCCCEEEECCCCE LDLPLPNLMGAHQIQNAGAALAVLRHLGADEAACEAAVVGAQWPARMQRLKTGPLVEIAG EECCCCHHHCHHHHHHCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCCCCEEECC AAELWLDGGHNAAAGIALADVLAKLPKRPTHLICGMLNTKDVTGYLRPLAAEAQSLTAVS CCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCHHHHHHHHHHHHHHCEEEEE IPGEAATLSAEETKAAASSVDLPATTAESVAEALTAILARDPDSRVLICGSLYLAGNILR CCCCCEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHH ENG CCC >Mature Secondary Structure TEQTSDAILARMMALHPKIIDLTLDRVWRLLAALENPQDKLPPVIHIAGTNGKGSTQAM CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEECCCCCCHHHHH IRAGLEGWGKSVHAYTSPHLARFHERIRLAGDLISEAHLTEVLDECYSANGDASITYFEI HHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEH TTVAGLLAFSRTPADYTLLEVGLGGRLDATNVITPEVSVITPVSIDHEQFLGNTLAKIAG HHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCC EKAGIIKRGVPVVVGPQAEEAMEVIEDTAMRLGAPLIAYGQHWHVHEERGRLVYQDERGL CCCCHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCEECCCEEEEECCCCCEEEECCCCE LDLPLPNLMGAHQIQNAGAALAVLRHLGADEAACEAAVVGAQWPARMQRLKTGPLVEIAG EECCCCHHHCHHHHHHCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHCCCCCCEEECC AAELWLDGGHNAAAGIALADVLAKLPKRPTHLICGMLNTKDVTGYLRPLAAEAQSLTAVS CCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHEECCCCCHHHHHHHHHHHHHHCEEEEE IPGEAATLSAEETKAAASSVDLPATTAESVAEALTAILARDPDSRVLICGSLYLAGNILR CCCCCEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHH ENG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2105929; 9618466 [H]