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The map label for this gene is 99082510

Identifier: 99082510

GI number: 99082510

Start: 2805428

End: 2806345

Strand: Direct

Name: 99082510

Synonym: TM1040_2670

Alternate gene names: NA

Gene position: 2805428-2806345 (Clockwise)

Preceding gene: 99082509

Following gene: 99082511

Centisome position: 87.64

GC content: 63.29

Gene sequence:

>918_bases
ATGAGCCTGACGCAAATCGGCTTTGACGAGGGAGAGGCGCTGCTGGAATGGGTGGCGCTGACGGATGCGCTGGCTGAGGG
GCACAGGCGCCCAAAGGCCGAGGTGGGCGATACGTTTCTCTATCGGGGCAAGGATACGCTGTTGTCGCGCTCGGCCTGGA
TCGACGGGCTTGGGATCGCGGTCAAGACGGCGATGATCTTTCCCGACAACCCGACCCGCGAAGTGCCGATGATCAACGGC
GCGGTGAGCCTCTTTGATGATGCCACCGGCCAGCCCGAGGCGCTGGTGGATTTTCACCTCGTCACAAAATGGAAAACCGC
CGGAGACAGTCTCTTGGGCGCGCGCAGGCTGGCCCATCCCAATGCCAAGGAAATCCTGATCGTAGGGGCGGGCACTGTCG
CGGCGAGCCTGATCGAAGCCTTTTCAGCCGTCTGGGGCGACGCGCAGATCCGCGTCTGGAACCGCACCATTGCAAAGGCC
GAGATGCTGGCAACAGCCTATCCCGGCGTCGCGGTGGCACCGGATCTGGAACAGGCGGTGACGGCTGCGGATATTATCCT
CACCTCGACCATGTCGACCGACCCGGTGATCCAAGGCGCCTGGCTGCGGCCGGGGCAGCATCTCAACATGATTGGTGCCT
ATCGGCCCGACATGCGCGAGGCGGACGATCTGGCCCTGAGCCGCGCCCGGATCTATTGCGACAGCTTTGACACCACGCTC
GACCACATCGGCGAGTTCAAGATCCCGCTTGCGTCGGGGGCAATGCAGCGGGCGGATGTGCTGGCGGATTTCTACGCGCT
GGATCGGTTTGGGCGGTTTGACCCCGAGGCCATCACGCTCTTCAAGAACGGCGGCGGGGCGCATCTGGACCTGATGACCA
GTCGTCACGTTCTGGATCTGTGGACGCAGCAGACATGA

Upstream 100 bases:

>100_bases
CTGCTGCCGTGCGCGGCTGGCACACCCATCTGTTCGATCGCCCCGAGACCTGGGCGGCGCGGTTGGTCGATGAGGGGCTG
CTAACTCAAGAGGAGGCACA

Downstream 100 bases:

>100_bases
TTTGGTTCCTCAGCGCAGTGCTCTGTCTGGGGGCGCTGCTGTTTTTGCCCGCCCTTCAGGAGACCCTGCGTCGGCCGCTT
ACCGAGTCGATGCGCCGCAA

Product: ornithine cyclodeaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSLTQIGFDEGEALLEWVALTDALAEGHRRPKAEVGDTFLYRGKDTLLSRSAWIDGLGIAVKTAMIFPDNPTREVPMING
AVSLFDDATGQPEALVDFHLVTKWKTAGDSLLGARRLAHPNAKEILIVGAGTVAASLIEAFSAVWGDAQIRVWNRTIAKA
EMLATAYPGVAVAPDLEQAVTAADIILTSTMSTDPVIQGAWLRPGQHLNMIGAYRPDMREADDLALSRARIYCDSFDTTL
DHIGEFKIPLASGAMQRADVLADFYALDRFGRFDPEAITLFKNGGGAHLDLMTSRHVLDLWTQQT

Sequences:

>Translated_305_residues
MSLTQIGFDEGEALLEWVALTDALAEGHRRPKAEVGDTFLYRGKDTLLSRSAWIDGLGIAVKTAMIFPDNPTREVPMING
AVSLFDDATGQPEALVDFHLVTKWKTAGDSLLGARRLAHPNAKEILIVGAGTVAASLIEAFSAVWGDAQIRVWNRTIAKA
EMLATAYPGVAVAPDLEQAVTAADIILTSTMSTDPVIQGAWLRPGQHLNMIGAYRPDMREADDLALSRARIYCDSFDTTL
DHIGEFKIPLASGAMQRADVLADFYALDRFGRFDPEAITLFKNGGGAHLDLMTSRHVLDLWTQQT
>Mature_304_residues
SLTQIGFDEGEALLEWVALTDALAEGHRRPKAEVGDTFLYRGKDTLLSRSAWIDGLGIAVKTAMIFPDNPTREVPMINGA
VSLFDDATGQPEALVDFHLVTKWKTAGDSLLGARRLAHPNAKEILIVGAGTVAASLIEAFSAVWGDAQIRVWNRTIAKAE
MLATAYPGVAVAPDLEQAVTAADIILTSTMSTDPVIQGAWLRPGQHLNMIGAYRPDMREADDLALSRARIYCDSFDTTLD
HIGEFKIPLASGAMQRADVLADFYALDRFGRFDPEAITLFKNGGGAHLDLMTSRHVLDLWTQQT

Specific function: Unknown

COG id: COG2423

COG function: function code E; Predicted ornithine cyclodeaminase, mu-crystallin homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ornithine cyclodeaminase family [H]

Homologues:

Organism=Homo sapiens, GI62241008, Length=233, Percent_Identity=33.4763948497854, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI4503065, Length=234, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24642678, Length=265, Percent_Identity=27.9245283018868, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014334
- InterPro:   IPR016040
- InterPro:   IPR003462 [H]

Pfam domain/function: PF02423 OCD_Mu_crystall [H]

EC number: NA

Molecular weight: Translated: 33180; Mature: 33049

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTQIGFDEGEALLEWVALTDALAEGHRRPKAEVGDTFLYRGKDTLLSRSAWIDGLGIA
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEE
VKTAMIFPDNPTREVPMINGAVSLFDDATGQPEALVDFHLVTKWKTAGDSLLGARRLAHP
EEEEEEECCCCCCCCCEECCHHEECCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCC
NAKEILIVGAGTVAASLIEAFSAVWGDAQIRVWNRTIAKAEMLATAYPGVAVAPDLEQAV
CCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEECCCHHHHH
TAADIILTSTMSTDPVIQGAWLRPGQHLNMIGAYRPDMREADDLALSRARIYCDSFDTTL
HHHHHHEEECCCCCCCEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHEEECCCHHHH
DHIGEFKIPLASGAMQRADVLADFYALDRFGRFDPEAITLFKNGGGAHLDLMTSRHVLDL
HHCCCEECCHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCHHHHH
WTQQT
HCCCC
>Mature Secondary Structure 
SLTQIGFDEGEALLEWVALTDALAEGHRRPKAEVGDTFLYRGKDTLLSRSAWIDGLGIA
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEE
VKTAMIFPDNPTREVPMINGAVSLFDDATGQPEALVDFHLVTKWKTAGDSLLGARRLAHP
EEEEEEECCCCCCCCCEECCHHEECCCCCCCCCCEEEEEEEEEECCCCHHHHHHHHHCCC
NAKEILIVGAGTVAASLIEAFSAVWGDAQIRVWNRTIAKAEMLATAYPGVAVAPDLEQAV
CCCEEEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCEECCCHHHHH
TAADIILTSTMSTDPVIQGAWLRPGQHLNMIGAYRPDMREADDLALSRARIYCDSFDTTL
HHHHHHEEECCCCCCCEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHEEECCCHHHH
DHIGEFKIPLASGAMQRADVLADFYALDRFGRFDPEAITLFKNGGGAHLDLMTSRHVLDL
HHCCCEECCHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCHHHHH
WTQQT
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]