| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is ccrMIM [H]
Identifier: 99082489
GI number: 99082489
Start: 2784374
End: 2785543
Strand: Reverse
Name: ccrMIM [H]
Synonym: TM1040_2649
Alternate gene names: 99082489
Gene position: 2785543-2784374 (Counterclockwise)
Preceding gene: 99082490
Following gene: 99082488
Centisome position: 87.02
GC content: 59.06
Gene sequence:
>1170_bases ATGACTCATCTTGTGGATAACCAGAATGAGCGCAAAAGCGCCGTGGTTATCGAGGCAGAGCAAATGAACAAAACCATCGC GAAGGGCGCCGCTACGGCGCTCCCTTTAAACACGATTCTTGATGGCGACTGTATCGAGCGGATGGCAAGCCTGCCGTCCA ATTCGATCGACATGATCTTCGCGGATCCGCCCTATAATCTCCAGCTCAAAGGGCAGTTGCACCGCCCTGACAACTCCAAG GTGGATGCGGTCGACGACGAGTGGGACCAGTTTTCCAGCTTTGGCGTCTATGACCAGTTCACGCGCGCGTGGTTGAAAGA GGCCCGCCGGATCCTGAAACCCAATGGCGCGCTTTGGGTGATCGGCTCTTATCACAACATCTTTCGCGTGGGCACGGCGC TGCAGGACGAGGGCTTCTGGATCCTGAACGATGTGGTCTGGCGCAAGTCGAACCCGATGCCGAACTTCCGTGGCAAGCGC TACACCAACGCCCATGAGACGATGATCTGGGCGTCGAAATCCGAAGGTGCCAAATATACCTTCAACTACGAGGCGCTGAA GGCGCTCAACGAAGGTATCCAGATGCGCTCGGACTGGGTGATGCCGATCTGTACCGGCCATGAGCGTCTGAAAGATGCCA ATGGCGACAAGGCGCATCCGACCCAGAAGCCCGAGGCGCTGTTGCACCGTATTCTGGTGGGCTCTACCAACCCCGGTGAC GTGGTTCTGGACCCGTTCTTTGGCACCGGCACCACCGGCGCGGTGGCCAAGATGCTCGGGCGGGAGTTCATCGGCATCGA GCGCGAGGAAGCCTATCGCAAGGTTGCCGAAGAGCGCATCAAGAACGTGCGCAAATTTGACCGTGAGGCGCTGCAGGTCT CGGCCTCCAAACGGGCAGAGCCACGGGTGCCCTTTGGCCAGCTGGTTGAACGCGGCATGCTGCGTCCGGGCGAGGAGCTC TATTCGATGAACCGACGCCACAAGGCGAAGGTCCGCGCGGATGGCACCTTGATCGGCGACAATATCAAGGGCTCGATCCA TCAGGTCGGCGCGCATCTTGAAAATGCGCCCTCCTGCAATGGCTGGACCTACTGGTGCTTCAAGAAGGACGGGAAGACCG TACCGATTGATGTGCTGCGCCAGCAGATCCGGGCGGAAATGCAAGCCTGA
Upstream 100 bases:
>100_bases CCCACATCATAGAAGGTCGTTCAAGCCGGTCCACAAGATATTGTATCAAGAGTGAACCGTAGCCTGCTGATTCAAAAAAC AAATTGACCTCGAATCCGGG
Downstream 100 bases:
>100_bases CCGGCGCTTAGCCGAATTCCGAATTTATTCGAACGCCGACAGCGCGCTGCCCAAGGGTTCAGCGCGCTGCACCTTGCCCC GCCGGTCTGGCGGGGTTTTT
Product: DNA methylase N-4/N-6
Products: NA
Alternate protein names: M.CcrMI; Adenine-specific methyltransferase CcrMI [H]
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MTHLVDNQNERKSAVVIEAEQMNKTIAKGAATALPLNTILDGDCIERMASLPSNSIDMIFADPPYNLQLKGQLHRPDNSK VDAVDDEWDQFSSFGVYDQFTRAWLKEARRILKPNGALWVIGSYHNIFRVGTALQDEGFWILNDVVWRKSNPMPNFRGKR YTNAHETMIWASKSEGAKYTFNYEALKALNEGIQMRSDWVMPICTGHERLKDANGDKAHPTQKPEALLHRILVGSTNPGD VVLDPFFGTGTTGAVAKMLGREFIGIEREEAYRKVAEERIKNVRKFDREALQVSASKRAEPRVPFGQLVERGMLRPGEEL YSMNRRHKAKVRADGTLIGDNIKGSIHQVGAHLENAPSCNGWTYWCFKKDGKTVPIDVLRQQIRAEMQA
Sequences:
>Translated_389_residues MTHLVDNQNERKSAVVIEAEQMNKTIAKGAATALPLNTILDGDCIERMASLPSNSIDMIFADPPYNLQLKGQLHRPDNSK VDAVDDEWDQFSSFGVYDQFTRAWLKEARRILKPNGALWVIGSYHNIFRVGTALQDEGFWILNDVVWRKSNPMPNFRGKR YTNAHETMIWASKSEGAKYTFNYEALKALNEGIQMRSDWVMPICTGHERLKDANGDKAHPTQKPEALLHRILVGSTNPGD VVLDPFFGTGTTGAVAKMLGREFIGIEREEAYRKVAEERIKNVRKFDREALQVSASKRAEPRVPFGQLVERGMLRPGEEL YSMNRRHKAKVRADGTLIGDNIKGSIHQVGAHLENAPSCNGWTYWCFKKDGKTVPIDVLRQQIRAEMQA >Mature_388_residues THLVDNQNERKSAVVIEAEQMNKTIAKGAATALPLNTILDGDCIERMASLPSNSIDMIFADPPYNLQLKGQLHRPDNSKV DAVDDEWDQFSSFGVYDQFTRAWLKEARRILKPNGALWVIGSYHNIFRVGTALQDEGFWILNDVVWRKSNPMPNFRGKRY TNAHETMIWASKSEGAKYTFNYEALKALNEGIQMRSDWVMPICTGHERLKDANGDKAHPTQKPEALLHRILVGSTNPGDV VLDPFFGTGTTGAVAKMLGREFIGIEREEAYRKVAEERIKNVRKFDREALQVSASKRAEPRVPFGQLVERGMLRPGEELY SMNRRHKAKVRADGTLIGDNIKGSIHQVGAHLENAPSCNGWTYWCFKKDGKTVPIDVLRQQIRAEMQA
Specific function: This methylase recognizes the double-stranded sequence GANTC and causes specific methylation on A-2 on both strands. Ccrm-mediated methylation has important cellular functions. Appears to contribute to the accurate cell-cycle control of DNA replication an
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=269, Percent_Identity=30.8550185873606, Blast_Score=120, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR002052 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 43968; Mature: 43836
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLVDNQNERKSAVVIEAEQMNKTIAKGAATALPLNTILDGDCIERMASLPSNSIDMIF CCCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHCCHHHHCCCHHHHHHHHCCCCCCEEEE ADPPYNLQLKGQLHRPDNSKVDAVDDEWDQFSSFGVYDQFTRAWLKEARRILKPNGALWV CCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEE IGSYHNIFRVGTALQDEGFWILNDVVWRKSNPMPNFRGKRYTNAHETMIWASKSEGAKYT EECCCCHHHHCCEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE FNYEALKALNEGIQMRSDWVMPICTGHERLKDANGDKAHPTQKPEALLHRILVGSTNPGD ECHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC VVLDPFFGTGTTGAVAKMLGREFIGIEREEAYRKVAEERIKNVRKFDREALQVSASKRAE EEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PRVPFGQLVERGMLRPGEELYSMNRRHKAKVRADGTLIGDNIKGSIHQVGAHLENAPSCN CCCCHHHHHHHHCCCCCHHHHHCCHHHHCEEEECCEEECCCCCCHHHHHHHHHCCCCCCC GWTYWCFKKDGKTVPIDVLRQQIRAEMQA CEEEEEECCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure THLVDNQNERKSAVVIEAEQMNKTIAKGAATALPLNTILDGDCIERMASLPSNSIDMIF CCCCCCCCCCCCEEEEEHHHHHHHHHHCCHHHCCHHHHCCCHHHHHHHHCCCCCCEEEE ADPPYNLQLKGQLHRPDNSKVDAVDDEWDQFSSFGVYDQFTRAWLKEARRILKPNGALWV CCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEE IGSYHNIFRVGTALQDEGFWILNDVVWRKSNPMPNFRGKRYTNAHETMIWASKSEGAKYT EECCCCHHHHCCEECCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEE FNYEALKALNEGIQMRSDWVMPICTGHERLKDANGDKAHPTQKPEALLHRILVGSTNPGD ECHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC VVLDPFFGTGTTGAVAKMLGREFIGIEREEAYRKVAEERIKNVRKFDREALQVSASKRAE EEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PRVPFGQLVERGMLRPGEELYSMNRRHKAKVRADGTLIGDNIKGSIHQVGAHLENAPSCN CCCCHHHHHHHHCCCCCHHHHHCCHHHHCEEEECCEEECCCCCCHHHHHHHHHCCCCCCC GWTYWCFKKDGKTVPIDVLRQQIRAEMQA CEEEEEECCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8289276 [H]