| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is cyaA [H]
Identifier: 99082488
GI number: 99082488
Start: 2782796
End: 2784190
Strand: Reverse
Name: cyaA [H]
Synonym: TM1040_2648
Alternate gene names: 99082488
Gene position: 2784190-2782796 (Counterclockwise)
Preceding gene: 99082489
Following gene: 99082487
Centisome position: 86.98
GC content: 61.86
Gene sequence:
>1395_bases ATGGCTGATGTCGCCCTAACCAAAGCAGACCCGCCCGCGCGCGCGTCGCTGGATCCGATTTTGCAAGACGACGCTTTGCA GTCCCAACACATCCATGCCGCGCTTGAGGAACACAAGAAGCGTGGCGTCGAGATGGCCGTTCTGGCGCGCTGGATCATCA TGCCGATGGTGGCCGTGTTCCTCATTGCGGTCTATCCGGAGCCGTCGCAGCTTTATTATGTGGCGCTCCTCGCGCTCCTG TGCGTCAACGGGTTTTTCATCCGCCGTTTTGCGCGGGTGGGGCGGTCGCGGGCCGAGCTGGGCCTGATCATGCTGGACCT TGTGCTGATGACCTTTGGCATGGTGGTACCCAATCCGTTCGATCCGAACGAGATGCCGGTACCGATGCTGTATCAGTATG ATAACTTCATGTATTTCTTTATTATTCTTGCAACCGGTGCCCTTGCCTACAGCTGGCGGACGGTGATGGCGATCGGGGTC TGGGCAAGCGTGATCTGGCTCGGGGCGGCGGGGCTGATGTGGGCCTTCATGACCCCGGACGAAGAGCTGGCGCGGCGCCT CTCCGAGGTGCTGGTGGACTGGCCGCATGTGCAGGATTTGTACAATCCAAACGACGTCGGATTCCGGTTTCGCATCCAGG AAGCGATGGTGTTCCTGATGGTGGCGGCGATCCTTGCGCAATCCACCCGGCGGTTCTATCTGATGCTGGACCAGAATGCC GATCTGGCGCGAGAGCGGGCCAATCTGTCGCGCTACTTCTCGCCCAATGTGGTCGACCAGCTGTCGCAGAACGACGAGGC GATCAGCCAGGTGCGCACCTCGCGCATCGCGATTTTATTTGTTGATATCGTTGGCTTTACGCGACTGGCAGAGCATCGGG ACGCGGTCGAGGTGATCGAGCTCTTGCGCGGGTTTCATGGCCGCATGGAGGCGGAAGTCTTTCGCCATGGCGGCACGCTC GACAAATATCTTGGGGATGGGTTGATGGCGACCTTTGGCACGCCTGCTCCGGGCCCGCAGGATGCCTCGGACGCGCTGGC CTGCGCGCGGGCGATGTGCGCGGTGCTGGACCAGTGGAACGCCGAGCGCCGCGCCACTGGAGAGCCTGAGATCCATGCTG GCATCGGCATCCATTTTGGCGAGGCGGTGCAAGGCGACATCGGCGCAAACCGCCTGGAATACGCCGTCATTGGCACCGCC GTGAACATCGCCTCGCGGCTTGAGGGCATGACCCGCCCGATGCAGGCCCGAATCGTGATGAGCGACGCCCTCTATCGCCG GGTGCAAGAGGAGGGCGGTGCTGCGGCGCTTTTGCGCGGTTTTCACTGTACGCCGGAGCAAACCATCCGTGGACTGCAAG AACCCATGCCGGTCTGGGCCCTGACGTCGCTTTGA
Upstream 100 bases:
>100_bases GGTCTGGCGGGGTTTTTTGCATGTGACGCGACAAATGGCGCGTGTGCCTGCGCGGTTTTGGCGATAGAACTGGTAGCCAA AATCCCCAAGGGAGGGCCGG
Downstream 100 bases:
>100_bases TAAGCCATTCGTTAAGGGTCTGAACCTATGGTGACATCACCATTTCAAAAGGTTTATGTGATGTCGCAGATCCATCGAGA CGAGCTGCTTTTCTGGTTCG
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1; AC 1 [H]
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MADVALTKADPPARASLDPILQDDALQSQHIHAALEEHKKRGVEMAVLARWIIMPMVAVFLIAVYPEPSQLYYVALLALL CVNGFFIRRFARVGRSRAELGLIMLDLVLMTFGMVVPNPFDPNEMPVPMLYQYDNFMYFFIILATGALAYSWRTVMAIGV WASVIWLGAAGLMWAFMTPDEELARRLSEVLVDWPHVQDLYNPNDVGFRFRIQEAMVFLMVAAILAQSTRRFYLMLDQNA DLARERANLSRYFSPNVVDQLSQNDEAISQVRTSRIAILFVDIVGFTRLAEHRDAVEVIELLRGFHGRMEAEVFRHGGTL DKYLGDGLMATFGTPAPGPQDASDALACARAMCAVLDQWNAERRATGEPEIHAGIGIHFGEAVQGDIGANRLEYAVIGTA VNIASRLEGMTRPMQARIVMSDALYRRVQEEGGAAALLRGFHCTPEQTIRGLQEPMPVWALTSL
Sequences:
>Translated_464_residues MADVALTKADPPARASLDPILQDDALQSQHIHAALEEHKKRGVEMAVLARWIIMPMVAVFLIAVYPEPSQLYYVALLALL CVNGFFIRRFARVGRSRAELGLIMLDLVLMTFGMVVPNPFDPNEMPVPMLYQYDNFMYFFIILATGALAYSWRTVMAIGV WASVIWLGAAGLMWAFMTPDEELARRLSEVLVDWPHVQDLYNPNDVGFRFRIQEAMVFLMVAAILAQSTRRFYLMLDQNA DLARERANLSRYFSPNVVDQLSQNDEAISQVRTSRIAILFVDIVGFTRLAEHRDAVEVIELLRGFHGRMEAEVFRHGGTL DKYLGDGLMATFGTPAPGPQDASDALACARAMCAVLDQWNAERRATGEPEIHAGIGIHFGEAVQGDIGANRLEYAVIGTA VNIASRLEGMTRPMQARIVMSDALYRRVQEEGGAAALLRGFHCTPEQTIRGLQEPMPVWALTSL >Mature_463_residues ADVALTKADPPARASLDPILQDDALQSQHIHAALEEHKKRGVEMAVLARWIIMPMVAVFLIAVYPEPSQLYYVALLALLC VNGFFIRRFARVGRSRAELGLIMLDLVLMTFGMVVPNPFDPNEMPVPMLYQYDNFMYFFIILATGALAYSWRTVMAIGVW ASVIWLGAAGLMWAFMTPDEELARRLSEVLVDWPHVQDLYNPNDVGFRFRIQEAMVFLMVAAILAQSTRRFYLMLDQNAD LARERANLSRYFSPNVVDQLSQNDEAISQVRTSRIAILFVDIVGFTRLAEHRDAVEVIELLRGFHGRMEAEVFRHGGTLD KYLGDGLMATFGTPAPGPQDASDALACARAMCAVLDQWNAERRATGEPEIHAGIGIHFGEAVQGDIGANRLEYAVIGTAV NIASRLEGMTRPMQARIVMSDALYRRVQEEGGAAALLRGFHCTPEQTIRGLQEPMPVWALTSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
Organism=Homo sapiens, GI4557255, Length=309, Percent_Identity=23.9482200647249, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71995895, Length=221, Percent_Identity=25.7918552036199, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71995893, Length=237, Percent_Identity=25.3164556962025, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71995899, Length=221, Percent_Identity=25.7918552036199, Blast_Score=75, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17551720, Length=169, Percent_Identity=26.6272189349112, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI161078020, Length=206, Percent_Identity=28.1553398058252, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI161076872, Length=185, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28574512, Length=185, Percent_Identity=27.027027027027, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24583976, Length=277, Percent_Identity=25.9927797833935, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 [H]
Pfam domain/function: PF00211 Guanylate_cyc [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 51749; Mature: 51618
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVALTKADPPARASLDPILQDDALQSQHIHAALEEHKKRGVEMAVLARWIIMPMVAVF CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LIAVYPEPSQLYYVALLALLCVNGFFIRRFARVGRSRAELGLIMLDLVLMTFGMVVPNPF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC DPNEMPVPMLYQYDNFMYFFIILATGALAYSWRTVMAIGVWASVIWLGAAGLMWAFMTPD CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCH EELARRLSEVLVDWPHVQDLYNPNDVGFRFRIQEAMVFLMVAAILAQSTRRFYLMLDQNA HHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCC DLARERANLSRYFSPNVVDQLSQNDEAISQVRTSRIAILFVDIVGFTRLAEHRDAVEVIE HHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LLRGFHGRMEAEVFRHGGTLDKYLGDGLMATFGTPAPGPQDASDALACARAMCAVLDQWN HHHHHCCCHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC AERRATGEPEIHAGIGIHFGEAVQGDIGANRLEYAVIGTAVNIASRLEGMTRPMQARIVM CCCCCCCCCCEEECCCEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SDALYRRVQEEGGAAALLRGFHCTPEQTIRGLQEPMPVWALTSL HHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure ADVALTKADPPARASLDPILQDDALQSQHIHAALEEHKKRGVEMAVLARWIIMPMVAVF CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LIAVYPEPSQLYYVALLALLCVNGFFIRRFARVGRSRAELGLIMLDLVLMTFGMVVPNPF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC DPNEMPVPMLYQYDNFMYFFIILATGALAYSWRTVMAIGVWASVIWLGAAGLMWAFMTPD CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCH EELARRLSEVLVDWPHVQDLYNPNDVGFRFRIQEAMVFLMVAAILAQSTRRFYLMLDQNA HHHHHHHHHHHHCCCCHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCEEEEEECCCC DLARERANLSRYFSPNVVDQLSQNDEAISQVRTSRIAILFVDIVGFTRLAEHRDAVEVIE HHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LLRGFHGRMEAEVFRHGGTLDKYLGDGLMATFGTPAPGPQDASDALACARAMCAVLDQWN HHHHHCCCHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC AERRATGEPEIHAGIGIHFGEAVQGDIGANRLEYAVIGTAVNIASRLEGMTRPMQARIVM CCCCCCCCCCEEECCCEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH SDALYRRVQEEGGAAALLRGFHCTPEQTIRGLQEPMPVWALTSL HHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]