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The map label for this gene is alkB2 [H]

Identifier: 99082486

GI number: 99082486

Start: 2779924

End: 2781066

Strand: Direct

Name: alkB2 [H]

Synonym: TM1040_2646

Alternate gene names: 99082486

Gene position: 2779924-2781066 (Clockwise)

Preceding gene: 99082485

Following gene: 99082492

Centisome position: 86.85

GC content: 61.42

Gene sequence:

>1143_bases
ATGACTGAGTTCATCCCGACCGAGAAACTGCGTGACTGGCGCCATGCGTTGCCCTTCTGGCTGTCGCTGGCGCTGGTGCC
GCTGGTCTGGGCTGGCGCCTATCTGGGCAGTTGGTGGGTGCTGATGACACCGCTGGCGACCTGGTATCTCTTTGCGGTTC
TGGACGGGGTTCTCGGGCTCGAACTCGAAAATGCCGACCCGCAAACGGCCGAGGCGGACCTCAAGTGGTATGTGCGGCTG
ACCTCGGTCTGGGTGCCGATCCATGTTCTGTGTCTCTTTGGCCTTATCGCCTATGTCAGCGACGCCACGCATCTGAGCCG
GCTTGAAAAGATCGGCGTTTTCTTTGGCATGGGGGTGATCTCTGGCACCATCGGGATCAACTACAGCCACGAGCTGATGC
ACCAACGCAGCCGGCTGGAGCGCTGGCTCGCGGATATTCTGCTTGCCATGGTGCTCTATTCGCATTTCCGCTCCGAGCAT
CTTCTGGTGCATCACCGCTATGTGGGCACGCCCCGCGACCCGGTGACGGCGCGCTATAACGAGGGGTTTCACCGCTTTTA
TCCGCGCGTGCTCTGGCAATGCTGGCGCTCTGCGTTTGGAGCCGAGGCAGACCGGCTGGCGCGCAAATCCCTGCCCTGGA
CGCACCGCAGCAATCCCTTCTGGCGCTATTGGGCGCTTCAGCTCGGGATGCTTGCACTGGCCTTTGCCTTGGGCGGGCTG
TCGGGGGTGTTGCTGTTCCTTGTGCAGGCCAGCGCCGCGATCTGGCAGCTGGAGCTGGTGAATTACATCGAACACTATGG
GCTGACGCGCAAACATCTGGGCGATGGCAAATACGAACATGTCAAACCGCATCACTCGTGGAACGCCGCGCATAAGGCCT
CGAACTGGCTGCTGATCAACCTGCAGCGCCACTCCGACCATCACTACAAACCCGACCGGCGCTTTCCCCTGCTGCAGAAC
TACTCCGCATCCGAAGCGCCGCAATTGCCCTATGGGTATCCGGTGATGTCGATTGCGGCGATGATCCCGCCGCTGTGGCA
GCGCATCATGAACCCGCGCGTGCGGCGCTGGCGCAAGCAATATTACCCGGAGATCACGGACTGGAAGCCCTACAACCGGC
ACCAAACCCCGATGCCGCGCTGA

Upstream 100 bases:

>100_bases
TTGATCTGACGCACCGTTAAGTTCACGACTTCCCCCTTGGGATACGCCCCGAACGGGTCTAGGCTCCAGAGTGAGACGCC
TCTGCCGCACGGAGACCTTC

Downstream 100 bases:

>100_bases
CGATCGCTCGGCCCTGAGTGCACCGGTGGCCGGATGTACGCCATGTCTCGCGCTGGCATCCTGTCTCGTGCTTACATCCT
GCGTCGCGTTTGGCTCATGC

Product: alkane 1-monooxygenase

Products: NA

Alternate protein names: Alkane hydroxylase; AHs; Terminal alkane hydroxylase [H]

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MTEFIPTEKLRDWRHALPFWLSLALVPLVWAGAYLGSWWVLMTPLATWYLFAVLDGVLGLELENADPQTAEADLKWYVRL
TSVWVPIHVLCLFGLIAYVSDATHLSRLEKIGVFFGMGVISGTIGINYSHELMHQRSRLERWLADILLAMVLYSHFRSEH
LLVHHRYVGTPRDPVTARYNEGFHRFYPRVLWQCWRSAFGAEADRLARKSLPWTHRSNPFWRYWALQLGMLALAFALGGL
SGVLLFLVQASAAIWQLELVNYIEHYGLTRKHLGDGKYEHVKPHHSWNAAHKASNWLLINLQRHSDHHYKPDRRFPLLQN
YSASEAPQLPYGYPVMSIAAMIPPLWQRIMNPRVRRWRKQYYPEITDWKPYNRHQTPMPR

Sequences:

>Translated_380_residues
MTEFIPTEKLRDWRHALPFWLSLALVPLVWAGAYLGSWWVLMTPLATWYLFAVLDGVLGLELENADPQTAEADLKWYVRL
TSVWVPIHVLCLFGLIAYVSDATHLSRLEKIGVFFGMGVISGTIGINYSHELMHQRSRLERWLADILLAMVLYSHFRSEH
LLVHHRYVGTPRDPVTARYNEGFHRFYPRVLWQCWRSAFGAEADRLARKSLPWTHRSNPFWRYWALQLGMLALAFALGGL
SGVLLFLVQASAAIWQLELVNYIEHYGLTRKHLGDGKYEHVKPHHSWNAAHKASNWLLINLQRHSDHHYKPDRRFPLLQN
YSASEAPQLPYGYPVMSIAAMIPPLWQRIMNPRVRRWRKQYYPEITDWKPYNRHQTPMPR
>Mature_379_residues
TEFIPTEKLRDWRHALPFWLSLALVPLVWAGAYLGSWWVLMTPLATWYLFAVLDGVLGLELENADPQTAEADLKWYVRLT
SVWVPIHVLCLFGLIAYVSDATHLSRLEKIGVFFGMGVISGTIGINYSHELMHQRSRLERWLADILLAMVLYSHFRSEHL
LVHHRYVGTPRDPVTARYNEGFHRFYPRVLWQCWRSAFGAEADRLARKSLPWTHRSNPFWRYWALQLGMLALAFALGGLS
GVLLFLVQASAAIWQLELVNYIEHYGLTRKHLGDGKYEHVKPHHSWNAAHKASNWLLINLQRHSDHHYKPDRRFPLLQNY
SASEAPQLPYGYPVMSIAAMIPPLWQRIMNPRVRRWRKQYYPEITDWKPYNRHQTPMPR

Specific function: Catalyzes the hydroxylation of n-alkanes in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C12-C20 hydrocarbones [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.15.3 [H]

Molecular weight: Translated: 44553; Mature: 44422

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEFIPTEKLRDWRHALPFWLSLALVPLVWAGAYLGSWWVLMTPLATWYLFAVLDGVLGL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ELENADPQTAEADLKWYVRLTSVWVPIHVLCLFGLIAYVSDATHLSRLEKIGVFFGMGVI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGTIGINYSHELMHQRSRLERWLADILLAMVLYSHFRSEHLLVHHRYVGTPRDPVTARYN
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHC
EGFHRFYPRVLWQCWRSAFGAEADRLARKSLPWTHRSNPFWRYWALQLGMLALAFALGGL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGVLLFLVQASAAIWQLELVNYIEHYGLTRKHLGDGKYEHVKPHHSWNAAHKASNWLLIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEE
LQRHSDHHYKPDRRFPLLQNYSASEAPQLPYGYPVMSIAAMIPPLWQRIMNPRVRRWRKQ
EEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
YYPEITDWKPYNRHQTPMPR
HCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEFIPTEKLRDWRHALPFWLSLALVPLVWAGAYLGSWWVLMTPLATWYLFAVLDGVLGL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ELENADPQTAEADLKWYVRLTSVWVPIHVLCLFGLIAYVSDATHLSRLEKIGVFFGMGVI
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGTIGINYSHELMHQRSRLERWLADILLAMVLYSHFRSEHLLVHHRYVGTPRDPVTARYN
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHC
EGFHRFYPRVLWQCWRSAFGAEADRLARKSLPWTHRSNPFWRYWALQLGMLALAFALGGL
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SGVLLFLVQASAAIWQLELVNYIEHYGLTRKHLGDGKYEHVKPHHSWNAAHKASNWLLIN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHCCCCEEEEE
LQRHSDHHYKPDRRFPLLQNYSASEAPQLPYGYPVMSIAAMIPPLWQRIMNPRVRRWRKQ
EEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
YYPEITDWKPYNRHQTPMPR
HCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]