Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yicG [C]

Identifier: 99082414

GI number: 99082414

Start: 2714499

End: 2715122

Strand: Direct

Name: yicG [C]

Synonym: TM1040_2574

Alternate gene names: 99082414

Gene position: 2714499-2715122 (Clockwise)

Preceding gene: 99082413

Following gene: 99082421

Centisome position: 84.8

GC content: 63.14

Gene sequence:

>624_bases
ATGACCATTCTGACCCTTCTCGATTACGCCTCGGTCATCGTGTTTGCTGCCTCTGGCGCTATGGTCGCAAGCCGCGCTCA
GCTTGATATTGTTGGCTTTGCCTTTATCGCCTGCCTTACGGCAGTGGGGGGTGGCACCGTGCGCGATCTGCTTTTGGACC
GCCACCCGATCTTTTGGGTGGGCGATCCCATGCCTATCCTGCTAGCATCCGGTGTTGCCGTCCTGGTGTTCTTCACTGCG
CATCTTGTCGAGAGCCGCCTGCGCTGGGTGATCTGGCTCGATACCTTTGCGCTGGCCATCGCTGTCCCTGCCGGAACCGG
TGCGGCGCTGGAGCTAGGGTATGGCCCGGTCATCATCGTCTTGATGGGCATGGCAACGGGCAGTCTCGGCGGCTTGATGC
GGGACGTAGTGTGCAACGAGGTGCCTTTGGTCCTGAAACAGGGCGAGCTCTATATTTCCTGCGCCATGGCGGGCGCAAGC
ACCGCCGCAATCCTGGTCTGGCTGGGTCTGCCGTCAGGAACCGCCCTGCTCGCCTGCGCCGGCACCACATGGGTAACCCG
CGCGGGGTCACTGGCCTTTGGCTGGCACCTCCCGGTCTACAAGCCGCGCCCGCCGCGCCAGTAG

Upstream 100 bases:

>100_bases
GCAGACATACCTGCGCTGTGCGCCGTGCGTGTCCGGCGCCCTTGGTTATACGCCGCCACCCAGCTAGGATCGGGGCAACT
CTAAGCGACGAGACCAGCGC

Downstream 100 bases:

>100_bases
AATCTCCGCGCACCATTCAAGGGAACTTTTGCCTGATCGCAGGCCGCCTGTGGCTATCGGTTCTGAAGTTTTTGCCACAA
GAAAATCAAGGCGACCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTILTLLDYASVIVFAASGAMVASRAQLDIVGFAFIACLTAVGGGTVRDLLLDRHPIFWVGDPMPILLASGVAVLVFFTA
HLVESRLRWVIWLDTFALAIAVPAGTGAALELGYGPVIIVLMGMATGSLGGLMRDVVCNEVPLVLKQGELYISCAMAGAS
TAAILVWLGLPSGTALLACAGTTWVTRAGSLAFGWHLPVYKPRPPRQ

Sequences:

>Translated_207_residues
MTILTLLDYASVIVFAASGAMVASRAQLDIVGFAFIACLTAVGGGTVRDLLLDRHPIFWVGDPMPILLASGVAVLVFFTA
HLVESRLRWVIWLDTFALAIAVPAGTGAALELGYGPVIIVLMGMATGSLGGLMRDVVCNEVPLVLKQGELYISCAMAGAS
TAAILVWLGLPSGTALLACAGTTWVTRAGSLAFGWHLPVYKPRPPRQ
>Mature_206_residues
TILTLLDYASVIVFAASGAMVASRAQLDIVGFAFIACLTAVGGGTVRDLLLDRHPIFWVGDPMPILLASGVAVLVFFTAH
LVESRLRWVIWLDTFALAIAVPAGTGAALELGYGPVIIVLMGMATGSLGGLMRDVVCNEVPLVLKQGELYISCAMAGAST
AAILVWLGLPSGTALLACAGTTWVTRAGSLAFGWHLPVYKPRPPRQ

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=157, Percent_Identity=36.3057324840764, Blast_Score=98, Evalue=3e-22,
Organism=Escherichia coli, GI1786352, Length=195, Percent_Identity=32.3076923076923, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21694; Mature: 21563

Theoretical pI: Translated: 7.38; Mature: 7.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILTLLDYASVIVFAASGAMVASRAQLDIVGFAFIACLTAVGGGTVRDLLLDRHPIFWV
CEEEHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEE
GDPMPILLASGVAVLVFFTAHLVESRLRWVIWLDTFALAIAVPAGTGAALELGYGPVIIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHEEEEEEECCCCCCEEEECCCCEEEE
LMGMATGSLGGLMRDVVCNEVPLVLKQGELYISCAMAGASTAAILVWLGLPSGTALLACA
EEHHCCCCHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEC
GTTWVTRAGSLAFGWHLPVYKPRPPRQ
CCHHHHCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TILTLLDYASVIVFAASGAMVASRAQLDIVGFAFIACLTAVGGGTVRDLLLDRHPIFWV
EEEHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEE
GDPMPILLASGVAVLVFFTAHLVESRLRWVIWLDTFALAIAVPAGTGAALELGYGPVIIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEHEEEEEEECCCCCCEEEECCCCEEEE
LMGMATGSLGGLMRDVVCNEVPLVLKQGELYISCAMAGASTAAILVWLGLPSGTALLACA
EEHHCCCCHHHHHHHHHHCCCCEEEECCCEEEEEEECCCCCEEEEEEEECCCCCEEEEEC
GTTWVTRAGSLAFGWHLPVYKPRPPRQ
CCHHHHCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]