Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082375

Identifier: 99082375

GI number: 99082375

Start: 2675064

End: 2675777

Strand: Direct

Name: 99082375

Synonym: TM1040_2535

Alternate gene names: NA

Gene position: 2675064-2675777 (Clockwise)

Preceding gene: 99082369

Following gene: 99082376

Centisome position: 83.57

GC content: 58.82

Gene sequence:

>714_bases
ATGTCTAGAACGCTCACGACCATCGGTTTTGACGCAGATGATACGCTTTGGCACAACGAACGCTTCTTTCGTGTCACTCA
GGATCGCTTTGCCGAACTCCTTATGGATCACACATCCGAAGACATGGGGCCGGAAGCGCTGGATCGCAAGCTGCTGGACG
CAGAGAAACGCAATCTTGGCGCCTATGGCTACGGGGTCAAAGGCTTCACGCTCTCGATGATTGAAACCGCGATAGAGGTG
ACTGAGGGGCGCGTTCCGGCGGCGGTCATCAAAGAACTGCTGGAGGCTGGCCAGATGATGCTCTCCTTTCCGATCGAATT
GCTACCCCATGCGCAGACCGCAGTTGAAACCCTCGCCAAAGAGCACCGAGTCATCCTGATTACCAAGGGCGATCTGCTCG
ATCAGGAGCGCAAGCTCGCCCAATCTGGGCTGGGCGAGTTGTTCGACGCGGTCGAGGTGGTCTCAGAGAAGACACCGCAG
GTCTATATCGACATTTTTGAGCGTCACGGTGACGGCGCCGCGCGGGCCTTGATGGCCGGAAACTCCATGCGTTCCGATGT
GGTTCCGGTTGTGCGGGCTGGCGGCCACGGGGTCTATGTCCCGCATGGCGCAATTTGGGAAGTCGAGGCCGCAGAGCCCC
CCACAGAAAGCCCGCGCTATCACGAAATCCCCGACCTCGGCGCGCTCCCTGAGTTGGTTGAACGACTCGCCTAA

Upstream 100 bases:

>100_bases
GCATTAGCATAGGATCAACAGTTTCCAGTGGTGCATCTGATTTCGTCACCGGCTTATATAGCGGAAGACCCCACAAGGAA
AAGAGATTGAGGCCGGGATA

Downstream 100 bases:

>100_bases
AGGGGGAATTCCGAGGGTTATGTTAACCCTTCATTCATAACTGTGACTTTAGCGCTTCATTTGATCGCTAAATATCGGCG
TGATCCCGCTTTTTGCACCA

Product: haloacid dehalogenase-like hydrolase

Products: NA

Alternate protein names: Haloacid Dehalogenase Domain Protein Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Hydrolase Haloacid Dehalogenase Family; Haloacid Dehydrogenase Hydrolase; Hydrolase Family Protein; Halogenase-Like Hydrolase; Haloacid Dehalogenase-Like Family Protein; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Family Hydrolase; Hydrolase Haloacid Dehalogenase Family Protein; HAD Family Phosphatase; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSRTLTTIGFDADDTLWHNERFFRVTQDRFAELLMDHTSEDMGPEALDRKLLDAEKRNLGAYGYGVKGFTLSMIETAIEV
TEGRVPAAVIKELLEAGQMMLSFPIELLPHAQTAVETLAKEHRVILITKGDLLDQERKLAQSGLGELFDAVEVVSEKTPQ
VYIDIFERHGDGAARALMAGNSMRSDVVPVVRAGGHGVYVPHGAIWEVEAAEPPTESPRYHEIPDLGALPELVERLA

Sequences:

>Translated_237_residues
MSRTLTTIGFDADDTLWHNERFFRVTQDRFAELLMDHTSEDMGPEALDRKLLDAEKRNLGAYGYGVKGFTLSMIETAIEV
TEGRVPAAVIKELLEAGQMMLSFPIELLPHAQTAVETLAKEHRVILITKGDLLDQERKLAQSGLGELFDAVEVVSEKTPQ
VYIDIFERHGDGAARALMAGNSMRSDVVPVVRAGGHGVYVPHGAIWEVEAAEPPTESPRYHEIPDLGALPELVERLA
>Mature_236_residues
SRTLTTIGFDADDTLWHNERFFRVTQDRFAELLMDHTSEDMGPEALDRKLLDAEKRNLGAYGYGVKGFTLSMIETAIEVT
EGRVPAAVIKELLEAGQMMLSFPIELLPHAQTAVETLAKEHRVILITKGDLLDQERKLAQSGLGELFDAVEVVSEKTPQV
YIDIFERHGDGAARALMAGNSMRSDVVPVVRAGGHGVYVPHGAIWEVEAAEPPTESPRYHEIPDLGALPELVERLA

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26189; Mature: 26058

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTLTTIGFDADDTLWHNERFFRVTQDRFAELLMDHTSEDMGPEALDRKLLDAEKRNLG
CCCEEEEECCCCCCCEECCCHHEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
AYGYGVKGFTLSMIETAIEVTEGRVPAAVIKELLEAGQMMLSFPIELLPHAQTAVETLAK
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
EHRVILITKGDLLDQERKLAQSGLGELFDAVEVVSEKTPQVYIDIFERHGDGAARALMAG
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHCC
NSMRSDVVPVVRAGGHGVYVPHGAIWEVEAAEPPTESPRYHEIPDLGALPELVERLA
CCCCCCCHHHEECCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure 
SRTLTTIGFDADDTLWHNERFFRVTQDRFAELLMDHTSEDMGPEALDRKLLDAEKRNLG
CCEEEEECCCCCCCEECCCHHEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
AYGYGVKGFTLSMIETAIEVTEGRVPAAVIKELLEAGQMMLSFPIELLPHAQTAVETLAK
CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHH
EHRVILITKGDLLDQERKLAQSGLGELFDAVEVVSEKTPQVYIDIFERHGDGAARALMAG
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHCC
NSMRSDVVPVVRAGGHGVYVPHGAIWEVEAAEPPTESPRYHEIPDLGALPELVERLA
CCCCCCCHHHEECCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA