| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is cya3 [H]
Identifier: 99082352
GI number: 99082352
Start: 2653223
End: 2654206
Strand: Direct
Name: cya3 [H]
Synonym: TM1040_2512
Alternate gene names: 99082352
Gene position: 2653223-2654206 (Clockwise)
Preceding gene: 99082349
Following gene: 99082359
Centisome position: 82.89
GC content: 61.59
Gene sequence:
>984_bases ATGCATGATCGCATCACCCGCAAATTGACAACGATCCTGGCCGCGGATGCCGAGCAATTCAGTGCGGCGATGACAACCGA TGAGGTAGGCACCTATACGGAGCTGCAGTCGGCGCGCGATGTGTTTTTCAAGCTGATCGAACGCCACGGCGGGCGGGTCG CCAATACCGCAGGCGACGGGCTGATTGCCGACTTCCCCTCGGTTGTCGAGGCGGTGCAATGTGCGATCGAGGTTCAGCAG GAGCTTGCCGCCAAGGACAGCGCCCTCTCCTTTCGGATCGGCGTAAATCTGGGCGATGTGATCTGTGATGGCGAGGATCT GATTGGCGAGGGCGTGAACCTCGCAGCCCGCTTGCAAACGATGGCAGAACCGGGTGGCGTCCTGATCTCGCAACAGGTCT ATGACCACGTCAAGAACAAGCTCTCCATCGGGTTTGAGTATCTGGGGGATCGCAGGCCACGCAACCTTCCCGAAGATGTC GCAGTCTATCGCATCTCTTTGGGCGCACCGCGCCCGAGCCGCGCCAGCCATCCACGCAGCAGCGCGCAGGTATGGTCGGA CCCCGATCCGTTTGCCGACGCGCCTCAGCGTGACTATGGGCTGACGGATGACGCTGAGGACCCAGAAGAGGTGCCCCTGC GCGGGCTGGATCGGCTCGTTGGCCGCCGCCTGCCGCTAAGCAAGCGCAGCAAGACACTGGTGCTTGTCGCAGCCGGGCTT TTTGTGATCGACCTTGCCTCAGGACGGGGAATCTGGGCGCACTGGCCGCTGCTGGTGATCGCAATGGTGATCGGGTTGCG AGACGGGCCGCGCCTGCTTGGACGCACGGAGTTTCGTGGCATCCCGGTCAAACTATGTGTGATCGCAGCCTTTCTGCTAC TGGTGAACCTTTTCAGCTGGCAGGGCGTCATGTGGTCCCTCTGGCCAATTGGAGGGATGGCTGCCTATTCTCTCCTGAAG CGACGCTGGTCAGAAGCCGAGTGA
Upstream 100 bases:
>100_bases TCATTGTCGCCAAAGCTGTGCTGTCATTGGAAACCGCAAACCCCTTGCATGCGGCGGCGCGAAAGCCCACTTTGGGCCTG TATTCATTTGGGCCCTTGCT
Downstream 100 bases:
>100_bases GGCCACTGCCCTGTGCGGACCTAGCACCGCTCTTGAAGAATTATCAGGATATAAAAACAAGAAACCCGCCGAATTGCTTC GGCGGGTTCAATCCGTTTGG
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 3; Adenylyl cyclase 3 [H]
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDGLIADFPSVVEAVQCAIEVQQ ELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQTMAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDV AVYRISLGAPRPSRASHPRSSAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSWQGVMWSLWPIGGMAAYSLLK RRWSEAE
Sequences:
>Translated_327_residues MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDGLIADFPSVVEAVQCAIEVQQ ELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQTMAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDV AVYRISLGAPRPSRASHPRSSAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSWQGVMWSLWPIGGMAAYSLLK RRWSEAE >Mature_327_residues MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDGLIADFPSVVEAVQCAIEVQQ ELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQTMAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDV AVYRISLGAPRPSRASHPRSSAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSWQGVMWSLWPIGGMAAYSLLK RRWSEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00515 TPR_1 [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 35885; Mature: 35885
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDG CCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCC LIADFPSVVEAVQCAIEVQQELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQT CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCHHHHCCCCHHHHHHHH MAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDVAVYRISLGAPRPSRASHPRS HCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCCCCC SAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCC FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSW CEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH QGVMWSLWPIGGMAAYSLLKRRWSEAE CCCHHHHCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHDRITRKLTTILAADAEQFSAAMTTDEVGTYTELQSARDVFFKLIERHGGRVANTAGDG CCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCC LIADFPSVVEAVQCAIEVQQELAAKDSALSFRIGVNLGDVICDGEDLIGEGVNLAARLQT CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCHHHHCCCCHHHHHHHH MAEPGGVLISQQVYDHVKNKLSIGFEYLGDRRPRNLPEDVAVYRISLGAPRPSRASHPRS HCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCCCCCCCCCC SAQVWSDPDPFADAPQRDYGLTDDAEDPEEVPLRGLDRLVGRRLPLSKRSKTLVLVAAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCEEEEEECCC FVIDLASGRGIWAHWPLLVIAMVIGLRDGPRLLGRTEFRGIPVKLCVIAAFLLLVNLFSW CEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH QGVMWSLWPIGGMAAYSLLKRRWSEAE CCCHHHHCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10485295; 11481432 [H]