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The map label for this gene is glcF [H]

Identifier: 99082340

GI number: 99082340

Start: 2641580

End: 2642899

Strand: Reverse

Name: glcF [H]

Synonym: TM1040_2500

Alternate gene names: 99082340

Gene position: 2642899-2641580 (Counterclockwise)

Preceding gene: 99082341

Following gene: 99082339

Centisome position: 82.57

GC content: 60.0

Gene sequence:

>1320_bases
ATGCAAACGAGTTTCACCGACGCGCAATTGCAGGACCCCGGTACGCAGCGGGCCAACGAGATCCTGCGCACCTGTGTGCA
CTGTGGTTTTTGTACGGCGACCTGTCCGACCTATCAAGTGCTCGGGGACGAGTTGGACAGCCCGAGAGGCCGGATTTACC
TCATCAAGGATATGCTCGAGAACGAGCGCGTGCCGGATGAGAAAACCGTAAAGCATATCGACAGATGCCTGTCGTGCCTT
GCTTGTATGACCACTTGTCCATCGGGCGTGCATTACATGCATCTTGTGGATCACGCGCGTGCCTATATCGACAAGCATTA
CAAACGCCCCTTTGGTGATCGGGCACTGCGGTGGATCCTGGCGCGCATCCTGCCCTATCCCACGCGGTTTCGCCTCGCGC
TGTTGGGAGCAAAGATTGCGCGTCCCTTCCGGGGACTGATGCCTGACCCAAGGCTGCGGGCGATGCTGGAGATGGCGCCA
AAGGTCATCCCCCCGGTGAGCCGCAATGACGACCCGCAGAGTTTTGCGCCGGAAGGGCGGCAAGTGAAACGCGTGGCGCT
TATGACGGGCTGCGCGCAAAAGGCGCTCAATACGGATATCAATGACGCCACCATCCGGCTCCTTCGGCGTTTGGGGTGCG
AGGTGGTTGTGGCGGACGGGGCCGGCTGTTGCGGGGCTCTGACGCATCACATGGGGCGTGAGGACGAAAGCCACGCAACC
GCCGCCAAGAACATCCGCGCGTGGATGGCAGAGAAGAACGGCAAGGGCCTTGATGCGATTGTCATCAACACATCGGGCTG
TGGTACCACGGTCAAGGACTACGGCCACATGTTCCGCAATGATGCGCTGGCACAGGATGCGGCAACTGTGTCGAACCTGG
CGATGGATATCTCCGAGTTGCTGATGCAGCTTGAAATGCCAGAGGCTGAGGATAAGGGGCTGACGGTCGCCTATCACGCC
GCCTGTTCGCTGCAGCATGGCCAACAGATCAAGACGCATCCCAAGACGCTGCTGAAACGCGCGGGCTTTCGAGTGGTTGA
ACCAGCCGACAGCCATCTGTGCTGCGGCTCTGCAGGGACCTATAATCTGCTGCAGCCGGAGATTTCCGCACAACTAAAGG
CACGCAAGCTGCGCACGCTTGAGGCGAAAAATCCCGACATCATCTCTGCGGGGAACATCGGGTGCATGATGCAAATCGGA
TCTGGCACCGAGATCCCGATCGTGCACACTGTGGAGCTCTTGGACTGGGCAACCGGAGGCCCTCAGCCACCCGCTCTCAC
GGCGGAGCGCAGCCGACCCTCAGTTCCCATCTTGCGCTGA

Upstream 100 bases:

>100_bases
CATCACCCGGAGCCTGCGCCTTTGGCGGCGATTTCAGCTGGGCTGCGGCAGCAATTTGATCCGCGTGGGATCTTCAATCC
GGGTTTGATGGGGTAAGACA

Downstream 100 bases:

>100_bases
AGCTGCACAGGCGGCATCACAGAAAGGCGCGCGGAATCGTCCTTCTGCGCCCAACTTTTGCCCGAAGCGTTGGCTAGGCT
GTCGCATAGGGGATGTGGAG

Product: protein of unknown function DUF224, cysteine-rich region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MQTSFTDAQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLENERVPDEKTVKHIDRCLSCL
ACMTTCPSGVHYMHLVDHARAYIDKHYKRPFGDRALRWILARILPYPTRFRLALLGAKIARPFRGLMPDPRLRAMLEMAP
KVIPPVSRNDDPQSFAPEGRQVKRVALMTGCAQKALNTDINDATIRLLRRLGCEVVVADGAGCCGALTHHMGREDESHAT
AAKNIRAWMAEKNGKGLDAIVINTSGCGTTVKDYGHMFRNDALAQDAATVSNLAMDISELLMQLEMPEAEDKGLTVAYHA
ACSLQHGQQIKTHPKTLLKRAGFRVVEPADSHLCCGSAGTYNLLQPEISAQLKARKLRTLEAKNPDIISAGNIGCMMQIG
SGTEIPIVHTVELLDWATGGPQPPALTAERSRPSVPILR

Sequences:

>Translated_439_residues
MQTSFTDAQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLENERVPDEKTVKHIDRCLSCL
ACMTTCPSGVHYMHLVDHARAYIDKHYKRPFGDRALRWILARILPYPTRFRLALLGAKIARPFRGLMPDPRLRAMLEMAP
KVIPPVSRNDDPQSFAPEGRQVKRVALMTGCAQKALNTDINDATIRLLRRLGCEVVVADGAGCCGALTHHMGREDESHAT
AAKNIRAWMAEKNGKGLDAIVINTSGCGTTVKDYGHMFRNDALAQDAATVSNLAMDISELLMQLEMPEAEDKGLTVAYHA
ACSLQHGQQIKTHPKTLLKRAGFRVVEPADSHLCCGSAGTYNLLQPEISAQLKARKLRTLEAKNPDIISAGNIGCMMQIG
SGTEIPIVHTVELLDWATGGPQPPALTAERSRPSVPILR
>Mature_439_residues
MQTSFTDAQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLENERVPDEKTVKHIDRCLSCL
ACMTTCPSGVHYMHLVDHARAYIDKHYKRPFGDRALRWILARILPYPTRFRLALLGAKIARPFRGLMPDPRLRAMLEMAP
KVIPPVSRNDDPQSFAPEGRQVKRVALMTGCAQKALNTDINDATIRLLRRLGCEVVVADGAGCCGALTHHMGREDESHAT
AAKNIRAWMAEKNGKGLDAIVINTSGCGTTVKDYGHMFRNDALAQDAATVSNLAMDISELLMQLEMPEAEDKGLTVAYHA
ACSLQHGQQIKTHPKTLLKRAGFRVVEPADSHLCCGSAGTYNLLQPEISAQLKARKLRTLEAKNPDIISAGNIGCMMQIG
SGTEIPIVHTVELLDWATGGPQPPALTAERSRPSVPILR

Specific function: Unknown

COG id: COG0247

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI48994913, Length=419, Percent_Identity=43.1980906921241, Blast_Score=330, Evalue=9e-92,
Organism=Escherichia coli, GI1786497, Length=240, Percent_Identity=26.6666666666667, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004017
- InterPro:   IPR012285
- InterPro:   IPR012257 [H]

Pfam domain/function: PF02754 CCG [H]

EC number: NA

Molecular weight: Translated: 48251; Mature: 48251

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTSFTDAQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCCEEEEEHHHHC
NERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIDKHYKRPFGDRALRWIL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ARILPYPTRFRLALLGAKIARPFRGLMPDPRLRAMLEMAPKVIPPVSRNDDPQSFAPEGR
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
QVKRVALMTGCAQKALNTDINDATIRLLRRLGCEVVVADGAGCCGALTHHMGREDESHAT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCHHHHH
AAKNIRAWMAEKNGKGLDAIVINTSGCGTTVKDYGHMFRNDALAQDAATVSNLAMDISEL
HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMQLEMPEAEDKGLTVAYHAACSLQHGQQIKTHPKTLLKRAGFRVVEPADSHLCCGSAGT
HHHHCCCCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCEECCCCCC
YNLLQPEISAQLKARKLRTLEAKNPDIISAGNIGCMMQIGSGTEIPIVHTVELLDWATGG
CCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCCEEHHHHHHHCCCC
PQPPALTAERSRPSVPILR
CCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQTSFTDAQLQDPGTQRANEILRTCVHCGFCTATCPTYQVLGDELDSPRGRIYLIKDMLE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCCEEEEEHHHHC
NERVPDEKTVKHIDRCLSCLACMTTCPSGVHYMHLVDHARAYIDKHYKRPFGDRALRWIL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
ARILPYPTRFRLALLGAKIARPFRGLMPDPRLRAMLEMAPKVIPPVSRNDDPQSFAPEGR
HHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCH
QVKRVALMTGCAQKALNTDINDATIRLLRRLGCEVVVADGAGCCGALTHHMGREDESHAT
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCHHHHH
AAKNIRAWMAEKNGKGLDAIVINTSGCGTTVKDYGHMFRNDALAQDAATVSNLAMDISEL
HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMQLEMPEAEDKGLTVAYHAACSLQHGQQIKTHPKTLLKRAGFRVVEPADSHLCCGSAGT
HHHHCCCCCCCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHCCCEEECCCCCCEECCCCCC
YNLLQPEISAQLKARKLRTLEAKNPDIISAGNIGCMMQIGSGTEIPIVHTVELLDWATGG
CCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCCEEHHHHHHHCCCC
PQPPALTAERSRPSVPILR
CCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8606183; 9278503 [H]