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The map label for this gene is adiY [C]

Identifier: 99082252

GI number: 99082252

Start: 2551834

End: 2552994

Strand: Reverse

Name: adiY [C]

Synonym: TM1040_2412

Alternate gene names: 99082252

Gene position: 2552994-2551834 (Counterclockwise)

Preceding gene: 99082254

Following gene: 99082251

Centisome position: 79.76

GC content: 57.71

Gene sequence:

>1161_bases
ATGGGGTATGCCTATCTGCGAGGACTTCGGAATGCACGGCTACAGAACAACAACGACGAAACATCGACAGTTTTTCGTTC
CTGTTCCGTGCCAACGTTCCAAAAGATGCGGAGCGCGTACGGGAGGCGAGTGGTGAAGGATGTTTTTGCCCCCAATGGTG
GGGTCTTTATCAACCGGCTGGTCGAATACGTAACCGGTCAGGGGCATGACTTCGAGAACATGCTAGCCCAAAAGCTCGCA
ATCTCTGAACCTCTGAGCTCGAGCGCTCAGGTCCTCCCTGTTTATGAACACTCCTTGGTCTTCGGGCTGGCGGAGAGGGT
GTGCAACGACACGTCGATTGGCTACGCTTTGGCCTATCAATGCACGCTGCGTGATGCAGGACTTGTGGGCTATGCGGTAA
GCGCCTCGGAGACTGCTGGTGAGGCGCTGTACACTCTAAGCCGCCTCAGCAACGTCTTTGAGGTCGTCTCTGCCTCCGCC
AGTGGCGGGCTTGTGGATCTGCGCTGGGACTTTGGATCGCAGGGTAAACTGGATCTGCGTCACTGGAGCGAGTTCATCGC
TACCCTCTTGGTTCGTAGCTTAAAAACCCTCTGCACCGGTGCGGTTGCGCCGGTAGGGGTTGAGTTCACCCATACTGCGC
CATCCTCCTCAGAGCAGGCGGTCCTGGCCTTTGGTGTCAAACCAACCTACCGCGGGCGCCTGAATCGTCTGACCTTTCGC
GAACAGGATCTGCGCCAGCCCTTGCGTAGTGCAGATGCAGGCTTGCTGAGGCTCCTGCTGGAGCATGCGGAGCTGTTGCG
CCGCCGCCCGGACAGGAACAGCAATGATCTGTCGATCACCGTTGAGCGTCTGATTATGGACGGCATGTCAGAAGGAGATG
CCAGCCTGGCGCAAGTGGCAGAGTCGCTGGATATGAGCCAGCGCACGCTGTCCCGGAAGCTTGCCAGCGAGGGGACGAGC
TTCTTTGCGATCCTGGAGGGGGTGCGAAAATCGCTGGCCCTGCGCTACCTCCAGCAAAACGAGAAATCCCTCTCAGAGAT
CTCCTTTGCTTTGGGCTACTCCAGTCTGAGCAGTTTCAATGACGCCTTCAGGCGTTGGTACGACCAAAGTCCCGGAAGCT
ATCGGAGCGATGCGCTCAAAGAGGCTGCTGTGAAGTCCTGA

Upstream 100 bases:

>100_bases
GGTTGAAACGTTGCCATGAAGGCAACAGTCAGGAACTTTTGCCTCACTTCCTGTCGGCTGACTATGTAATTTTTTGAAAT
CTGTTAACCCATGCGAAAAC

Downstream 100 bases:

>100_bases
AATCAATAGAGTATGGGTGGAACCAACATTCCCCTCTGTGAATGTGATTCCTGTTCGTCGGGGCGCGCAATCATAATGTC
TGGCTACAATCGATCCGCGA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MGYAYLRGLRNARLQNNNDETSTVFRSCSVPTFQKMRSAYGRRVVKDVFAPNGGVFINRLVEYVTGQGHDFENMLAQKLA
ISEPLSSSAQVLPVYEHSLVFGLAERVCNDTSIGYALAYQCTLRDAGLVGYAVSASETAGEALYTLSRLSNVFEVVSASA
SGGLVDLRWDFGSQGKLDLRHWSEFIATLLVRSLKTLCTGAVAPVGVEFTHTAPSSSEQAVLAFGVKPTYRGRLNRLTFR
EQDLRQPLRSADAGLLRLLLEHAELLRRRPDRNSNDLSITVERLIMDGMSEGDASLAQVAESLDMSQRTLSRKLASEGTS
FFAILEGVRKSLALRYLQQNEKSLSEISFALGYSSLSSFNDAFRRWYDQSPGSYRSDALKEAAVKS

Sequences:

>Translated_386_residues
MGYAYLRGLRNARLQNNNDETSTVFRSCSVPTFQKMRSAYGRRVVKDVFAPNGGVFINRLVEYVTGQGHDFENMLAQKLA
ISEPLSSSAQVLPVYEHSLVFGLAERVCNDTSIGYALAYQCTLRDAGLVGYAVSASETAGEALYTLSRLSNVFEVVSASA
SGGLVDLRWDFGSQGKLDLRHWSEFIATLLVRSLKTLCTGAVAPVGVEFTHTAPSSSEQAVLAFGVKPTYRGRLNRLTFR
EQDLRQPLRSADAGLLRLLLEHAELLRRRPDRNSNDLSITVERLIMDGMSEGDASLAQVAESLDMSQRTLSRKLASEGTS
FFAILEGVRKSLALRYLQQNEKSLSEISFALGYSSLSSFNDAFRRWYDQSPGSYRSDALKEAAVKS
>Mature_385_residues
GYAYLRGLRNARLQNNNDETSTVFRSCSVPTFQKMRSAYGRRVVKDVFAPNGGVFINRLVEYVTGQGHDFENMLAQKLAI
SEPLSSSAQVLPVYEHSLVFGLAERVCNDTSIGYALAYQCTLRDAGLVGYAVSASETAGEALYTLSRLSNVFEVVSASAS
GGLVDLRWDFGSQGKLDLRHWSEFIATLLVRSLKTLCTGAVAPVGVEFTHTAPSSSEQAVLAFGVKPTYRGRLNRLTFRE
QDLRQPLRSADAGLLRLLLEHAELLRRRPDRNSNDLSITVERLIMDGMSEGDASLAQVAESLDMSQRTLSRKLASEGTSF
FAILEGVRKSLALRYLQQNEKSLSEISFALGYSSLSSFNDAFRRWYDQSPGSYRSDALKEAAVKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 42593; Mature: 42461

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYAYLRGLRNARLQNNNDETSTVFRSCSVPTFQKMRSAYGRRVVKDVFAPNGGVFINRL
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VEYVTGQGHDFENMLAQKLAISEPLSSSAQVLPVYEHSLVFGLAERVCNDTSIGYALAYQ
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEE
CTLRDAGLVGYAVSASETAGEALYTLSRLSNVFEVVSASASGGLVDLRWDFGSQGKLDLR
EEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHH
HWSEFIATLLVRSLKTLCTGAVAPVGVEFTHTAPSSSEQAVLAFGVKPTYRGRLNRLTFR
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHCHHHHHHCH
EQDLRQPLRSADAGLLRLLLEHAELLRRRPDRNSNDLSITVERLIMDGMSEGDASLAQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
ESLDMSQRTLSRKLASEGTSFFAILEGVRKSLALRYLQQNEKSLSEISFALGYSSLSSFN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAFRRWYDQSPGSYRSDALKEAAVKS
HHHHHHHCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
GYAYLRGLRNARLQNNNDETSTVFRSCSVPTFQKMRSAYGRRVVKDVFAPNGGVFINRL
CHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VEYVTGQGHDFENMLAQKLAISEPLSSSAQVLPVYEHSLVFGLAERVCNDTSIGYALAYQ
HHHHCCCCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEE
CTLRDAGLVGYAVSASETAGEALYTLSRLSNVFEVVSASASGGLVDLRWDFGSQGKLDLR
EEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHH
HWSEFIATLLVRSLKTLCTGAVAPVGVEFTHTAPSSSEQAVLAFGVKPTYRGRLNRLTFR
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEECCCCCHHCHHHHHHCH
EQDLRQPLRSADAGLLRLLLEHAELLRRRPDRNSNDLSITVERLIMDGMSEGDASLAQVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH
ESLDMSQRTLSRKLASEGTSFFAILEGVRKSLALRYLQQNEKSLSEISFALGYSSLSSFN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAFRRWYDQSPGSYRSDALKEAAVKS
HHHHHHHCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 12368430 [H]