| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is amsG [H]
Identifier: 99082251
GI number: 99082251
Start: 2550750
End: 2551463
Strand: Reverse
Name: amsG [H]
Synonym: TM1040_2411
Alternate gene names: 99082251
Gene position: 2551463-2550750 (Counterclockwise)
Preceding gene: 99082252
Following gene: 99082250
Centisome position: 79.71
GC content: 58.96
Gene sequence:
>714_bases ATGAAAACACTCGATCACGGGGCGTTGAGACGCCCGACAGGGCGCGACTTTCCAGAGATCGCACTGGCGGAAGCGCTCCG CGAGGTTGGTCCCATCTATTCACACGGGGGCTACGCGGCTTTTGGCAAGCGTGCACTCGACATCGGCTTGGTTCTGCTTG CCCTTCCGATCGCCCTTCCGTTGCTTTTGGCCTGCGTTGTTGCGCTTTGGTTCGAGAGCGGGTCTCCTTTCTATCGGCAA AAGCGATTGGGCAAAGACGGGCGCGTGTTTTCCATGCTGAAACTGCGCACGATGGTGCCCGATGCCGAGGCGCTGCTACA ATGGCACCTGGCGCGTGATCCAGAGCTGCGCCGCGAATGGGAGCGCGATCAGAAGATCAAGGATGACCCGCGCGTGACTC GATTGGGTCGGATGATGCGGGTGACGTCGCTGGACGAGTTGCCCCAGCTGTGGAACGTGCTGATCGGCGATATGAGCCTT GTTGGTGCACGCCCCATGATGGTGGATCAGCTGTCGATCTATGGCAAAGCCGATGCATATTTCGCGCTGCGCCCGGGTAT CACCGGTCCCTGGCAGGTGGGCGAACGCAACGAGACCAGCTTTGCGGATCGTGCACGAATTGACGAGGCCTATTGCCGCA ATCTCTCCTTCAAGGAAGATCTGAACATTTTGTTCAGGACCCTTGGTGTCATATTGCGCAGCACCGGGTACTGA
Upstream 100 bases:
>100_bases GGGGCATGGGTCGCGCCGATGGCTAAGCTTTCCGGGGGATTGGAGAGCGACGTCACCTTCTCGGAGGTCTGAGTGATGTG TGAATATTTGGGGGTTGAAC
Downstream 100 bases:
>100_bases CGGCGCCCGTTTTCCCGCCTGCATACGGACAAACGGGCCAAGAGCGAAGCGCTCGCAGAGTTTTGATAGGTGCTATGTGA AAGACTACGTAGATCGTGAT
Product: undecaprenyl-phosphate galactosephosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MKTLDHGALRRPTGRDFPEIALAEALREVGPIYSHGGYAAFGKRALDIGLVLLALPIALPLLLACVVALWFESGSPFYRQ KRLGKDGRVFSMLKLRTMVPDAEALLQWHLARDPELRREWERDQKIKDDPRVTRLGRMMRVTSLDELPQLWNVLIGDMSL VGARPMMVDQLSIYGKADAYFALRPGITGPWQVGERNETSFADRARIDEAYCRNLSFKEDLNILFRTLGVILRSTGY
Sequences:
>Translated_237_residues MKTLDHGALRRPTGRDFPEIALAEALREVGPIYSHGGYAAFGKRALDIGLVLLALPIALPLLLACVVALWFESGSPFYRQ KRLGKDGRVFSMLKLRTMVPDAEALLQWHLARDPELRREWERDQKIKDDPRVTRLGRMMRVTSLDELPQLWNVLIGDMSL VGARPMMVDQLSIYGKADAYFALRPGITGPWQVGERNETSFADRARIDEAYCRNLSFKEDLNILFRTLGVILRSTGY >Mature_237_residues MKTLDHGALRRPTGRDFPEIALAEALREVGPIYSHGGYAAFGKRALDIGLVLLALPIALPLLLACVVALWFESGSPFYRQ KRLGKDGRVFSMLKLRTMVPDAEALLQWHLARDPELRREWERDQKIKDDPRVTRLGRMMRVTSLDELPQLWNVLIGDMSL VGARPMMVDQLSIYGKADAYFALRPGITGPWQVGERNETSFADRARIDEAYCRNLSFKEDLNILFRTLGVILRSTGY
Specific function: Involved in the biosynthesis of amylovoran which functions as a virulence factor. May act as a sugar transferase and may be involved in the export of the repeating unit by flipping the lipid carrier to the periplasmic face of the inner membrane [H]
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=214, Percent_Identity=35.981308411215, Blast_Score=94, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 - InterPro: IPR017472 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 26888; Mature: 26888
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLDHGALRRPTGRDFPEIALAEALREVGPIYSHGGYAAFGKRALDIGLVLLALPIALP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLLACVVALWFESGSPFYRQKRLGKDGRVFSMLKLRTMVPDAEALLQWHLARDPELRREW HHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH ERDQKIKDDPRVTRLGRMMRVTSLDELPQLWNVLIGDMSLVGARPMMVDQLSIYGKADAY HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEE FALRPGITGPWQVGERNETSFADRARIDEAYCRNLSFKEDLNILFRTLGVILRSTGY EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTLDHGALRRPTGRDFPEIALAEALREVGPIYSHGGYAAFGKRALDIGLVLLALPIALP CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LLLACVVALWFESGSPFYRQKRLGKDGRVFSMLKLRTMVPDAEALLQWHLARDPELRREW HHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHH ERDQKIKDDPRVTRLGRMMRVTSLDELPQLWNVLIGDMSLVGARPMMVDQLSIYGKADAY HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEE FALRPGITGPWQVGERNETSFADRARIDEAYCRNLSFKEDLNILFRTLGVILRSTGY EEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7596293 [H]