Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99082237

Identifier: 99082237

GI number: 99082237

Start: 2524618

End: 2525616

Strand: Direct

Name: 99082237

Synonym: TM1040_2397

Alternate gene names: NA

Gene position: 2524618-2525616 (Clockwise)

Preceding gene: 99082236

Following gene: 99082239

Centisome position: 78.87

GC content: 63.56

Gene sequence:

>999_bases
ATGCGCACTGCGCCACCTTCCCAGTGCGACACGCGCCCAAGCGGGCCCCTGCGTGTTGATGCCATTGTCATTGGGCGCAA
TGAGGGCACGCGTCTGCTGGCCTGCCTTGACAGTCTCGCAGGTCAGGTGCAGCGGATCATCTATGTCGACAGCGGTTCGA
CCGATGGTTCGGTTGCGCAGGCAGAGGCGCGTGGCGCTGAAGTCGTCGCGCTGGACATGTCACGCCCCTTTACTGCGGCC
CGCGCCCGAAATGCGGGGCTTCAGCATCTTGGCGTATCCGGGACACCTGGGCTGGTGCAATTCATTGACGGTGACTGCGT
GCTGGATACGGGCTGGCTGGCCCAGGCCACAGATTTCTTGGCCCATCACCCGGATGTGGCGGTTGTCTGTGGCCGCAGGC
GCGAGCGCGCACCCGAAGCCAGCGTGTACAATTGGCTCTGCGATCAGGAATGGAACACGCCAGTTGGCGAAACCCGTGCC
TGCGGAGGGGATGCACTGATGCGCCGCGACGCGCTTTTGGCGGTGGGGGGATACCGTGACACGCTGATTGCAGGCGAGGA
ACCAGAGCTCTGCGTGCGCCTGCGACACGCCGGCTGGCGGGTCTGGCGGCTGGATCATGAGATGACGCTGCATGACGCAC
AGATGTTCAGGTTTTCGCAGTGGTGGAACCGCACGCGTCGTGCAGGTCATGCCTTTGCCGAAGGCGCGTTCCTGCATGGC
GCGCCGCCTGAACGGCATTGGGTCACAGAAACACGCCGTGCGATTGTCTGGGGGGCGCTGCTGCCATTGCTGATCCTGCT
GAGCGCCGTCGTCTCGCCACTGCTTGCAGCCGCTCTGGCCCTTCTCTACCCGCTGCAGTTCCTACGCCTGTCGCGCAGGA
TGAGGCCGATCGCGGCCTTCTATTCCGTTCTCGGGAAATGCCCCGAAGCCCTCGGCGTGATCGAGTTTCATCTCAACAGG
CTGCGTGGCAGCCAGCGGGACTTAATCGAGTACAAATAG

Upstream 100 bases:

>100_bases
GATCAACCTCGACCTTACCAAATCCCTCACCGTGGCCGGCAAGGCCGATAGCGAAGGCGAGACGGGGCTCGGGGTGTATT
TCAAGCGGGATTATTAAGGC

Downstream 100 bases:

>100_bases
CTGCCCAGCCAGCGGCGACCGAGCGGTCTCCGTCCGCTCAGCGGTGAGTGGCGACCAGAGGATTGACCTAGATTTCGCGT
CTTGCGGCGCTTGCGTCCAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase Family 2 Domain Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQAEARGAEVVALDMSRPFTAA
RARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFLAHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRA
CGGDALMRRDALLAVGGYRDTLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG
APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAFYSVLGKCPEALGVIEFHLNR
LRGSQRDLIEYK

Sequences:

>Translated_332_residues
MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQAEARGAEVVALDMSRPFTAA
RARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFLAHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRA
CGGDALMRRDALLAVGGYRDTLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG
APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAFYSVLGKCPEALGVIEFHLNR
LRGSQRDLIEYK
>Mature_332_residues
MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQAEARGAEVVALDMSRPFTAA
RARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFLAHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRA
CGGDALMRRDALLAVGGYRDTLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG
APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAFYSVLGKCPEALGVIEFHLNR
LRGSQRDLIEYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36746; Mature: 36746

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQ
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHH
AEARGAEVVALDMSRPFTAARARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFL
HHCCCCEEEEEECCCCHHHHHHHCCCCHHCCCCCCCCEEEEECCCEEEECCHHHHHHHHH
AHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRACGGDALMRRDALLAVGGYRD
HCCCCEEEEECCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCC
TLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG
EEECCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEECC
APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSVLGKCPEALGVIEFHLNRLRGSQRDLIEYK
HHHHHHCHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQ
CCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHH
AEARGAEVVALDMSRPFTAARARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFL
HHCCCCEEEEEECCCCHHHHHHHCCCCHHCCCCCCCCEEEEECCCEEEECCHHHHHHHHH
AHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRACGGDALMRRDALLAVGGYRD
HCCCCEEEEECCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCC
TLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG
EEECCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEECC
APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSVLGKCPEALGVIEFHLNRLRGSQRDLIEYK
HHHHHHCHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA