| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082237
Identifier: 99082237
GI number: 99082237
Start: 2524618
End: 2525616
Strand: Direct
Name: 99082237
Synonym: TM1040_2397
Alternate gene names: NA
Gene position: 2524618-2525616 (Clockwise)
Preceding gene: 99082236
Following gene: 99082239
Centisome position: 78.87
GC content: 63.56
Gene sequence:
>999_bases ATGCGCACTGCGCCACCTTCCCAGTGCGACACGCGCCCAAGCGGGCCCCTGCGTGTTGATGCCATTGTCATTGGGCGCAA TGAGGGCACGCGTCTGCTGGCCTGCCTTGACAGTCTCGCAGGTCAGGTGCAGCGGATCATCTATGTCGACAGCGGTTCGA CCGATGGTTCGGTTGCGCAGGCAGAGGCGCGTGGCGCTGAAGTCGTCGCGCTGGACATGTCACGCCCCTTTACTGCGGCC CGCGCCCGAAATGCGGGGCTTCAGCATCTTGGCGTATCCGGGACACCTGGGCTGGTGCAATTCATTGACGGTGACTGCGT GCTGGATACGGGCTGGCTGGCCCAGGCCACAGATTTCTTGGCCCATCACCCGGATGTGGCGGTTGTCTGTGGCCGCAGGC GCGAGCGCGCACCCGAAGCCAGCGTGTACAATTGGCTCTGCGATCAGGAATGGAACACGCCAGTTGGCGAAACCCGTGCC TGCGGAGGGGATGCACTGATGCGCCGCGACGCGCTTTTGGCGGTGGGGGGATACCGTGACACGCTGATTGCAGGCGAGGA ACCAGAGCTCTGCGTGCGCCTGCGACACGCCGGCTGGCGGGTCTGGCGGCTGGATCATGAGATGACGCTGCATGACGCAC AGATGTTCAGGTTTTCGCAGTGGTGGAACCGCACGCGTCGTGCAGGTCATGCCTTTGCCGAAGGCGCGTTCCTGCATGGC GCGCCGCCTGAACGGCATTGGGTCACAGAAACACGCCGTGCGATTGTCTGGGGGGCGCTGCTGCCATTGCTGATCCTGCT GAGCGCCGTCGTCTCGCCACTGCTTGCAGCCGCTCTGGCCCTTCTCTACCCGCTGCAGTTCCTACGCCTGTCGCGCAGGA TGAGGCCGATCGCGGCCTTCTATTCCGTTCTCGGGAAATGCCCCGAAGCCCTCGGCGTGATCGAGTTTCATCTCAACAGG CTGCGTGGCAGCCAGCGGGACTTAATCGAGTACAAATAG
Upstream 100 bases:
>100_bases GATCAACCTCGACCTTACCAAATCCCTCACCGTGGCCGGCAAGGCCGATAGCGAAGGCGAGACGGGGCTCGGGGTGTATT TCAAGCGGGATTATTAAGGC
Downstream 100 bases:
>100_bases CTGCCCAGCCAGCGGCGACCGAGCGGTCTCCGTCCGCTCAGCGGTGAGTGGCGACCAGAGGATTGACCTAGATTTCGCGT CTTGCGGCGCTTGCGTCCAT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase Protein; Glycosyl Transferase Group 2 Family; Glycosyltransferase Family 2 Domain Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQAEARGAEVVALDMSRPFTAA RARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFLAHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRA CGGDALMRRDALLAVGGYRDTLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAFYSVLGKCPEALGVIEFHLNR LRGSQRDLIEYK
Sequences:
>Translated_332_residues MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQAEARGAEVVALDMSRPFTAA RARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFLAHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRA CGGDALMRRDALLAVGGYRDTLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAFYSVLGKCPEALGVIEFHLNR LRGSQRDLIEYK >Mature_332_residues MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQAEARGAEVVALDMSRPFTAA RARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFLAHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRA CGGDALMRRDALLAVGGYRDTLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAFYSVLGKCPEALGVIEFHLNR LRGSQRDLIEYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36746; Mature: 36746
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQ CCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHH AEARGAEVVALDMSRPFTAARARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFL HHCCCCEEEEEECCCCHHHHHHHCCCCHHCCCCCCCCEEEEECCCEEEECCHHHHHHHHH AHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRACGGDALMRRDALLAVGGYRD HCCCCEEEEECCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCC TLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG EEECCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEECC APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSVLGKCPEALGVIEFHLNRLRGSQRDLIEYK HHHHHHCHHHHHHHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure MRTAPPSQCDTRPSGPLRVDAIVIGRNEGTRLLACLDSLAGQVQRIIYVDSGSTDGSVAQ CCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHH AEARGAEVVALDMSRPFTAARARNAGLQHLGVSGTPGLVQFIDGDCVLDTGWLAQATDFL HHCCCCEEEEEECCCCHHHHHHHCCCCHHCCCCCCCCEEEEECCCEEEECCHHHHHHHHH AHHPDVAVVCGRRRERAPEASVYNWLCDQEWNTPVGETRACGGDALMRRDALLAVGGYRD HCCCCEEEEECCHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCEEEECCCCC TLIAGEEPELCVRLRHAGWRVWRLDHEMTLHDAQMFRFSQWWNRTRRAGHAFAEGAFLHG EEECCCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEECC APPERHWVTETRRAIVWGALLPLLILLSAVVSPLLAAALALLYPLQFLRLSRRMRPIAAF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSVLGKCPEALGVIEFHLNRLRGSQRDLIEYK HHHHHHCHHHHHHHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA