| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is tolQ [H]
Identifier: 99082208
GI number: 99082208
Start: 2489742
End: 2490437
Strand: Reverse
Name: tolQ [H]
Synonym: TM1040_2368
Alternate gene names: 99082208
Gene position: 2490437-2489742 (Counterclockwise)
Preceding gene: 99082209
Following gene: 99082207
Centisome position: 77.8
GC content: 58.62
Gene sequence:
>696_bases ATGGAAGCAGAAACTCTGGCACTGGCACAGGAGATTGATTTCTCCATGTGGGGGCTGTTCGCACGCGCGACGCTCACCGT AAAACTTGTGATGATCATGTTGATCGTGGCGTCGATCTGGTCGTGGTCCATTATCATTCAGAAAGTGATCACCTATCGCA CAGCACGTCGCGAAGCGCAGGTGTTTGAGCGCGCCTTTTGGTCCGGCAACCCGCTGGACGAGCTGTTTGAGGAGATCGGA GCCGAGCCCTCGGGCCGGTCAGAGCGCATCTTTGCAGCTGGCATGATCGAATGGCGCCGCAGTCACCGAACGGACGGAGC GCTGATACCGGGCGCGCAGGCGCGCATCGACCGCTCCATGGATGTGGCGATCTCCAAGGAGAGCGAGGGTCTTCAGAGCG GACTACAGGTGCTGGCGACCATCGGCTCGACCACGCCCTTCATCGGGCTTTTCGGAACGGTCTGGGGTATCATGAATGCG TTCATCGAGATCGCAGAGCAGCAAAACACCAACCTTGCCGTTGTCGCACCGGGGATTGCCGAGGCGCTTTTGGCGACGGG GCTGGGGCTATTGGCTGCGATCCCGGCGGTGATCTTTTATAACAAACTCTCGGCGGATTCTGATCGCATCATTGGCGGCT ATGAGGCCTTTGCTGATGAATTCGCGACCATCTTCTCGCGCCAGTTGGACAGCTGA
Upstream 100 bases:
>100_bases CCCCCTGTTTCCTTGGCAATGTCGCTTGTTTTGCGCTAGCGTTCGCCCCAATTGGGCTGCGCAACCTAAACGACGCGGCA ACTGGCGATAGAGCAGGCAG
Downstream 100 bases:
>100_bases GCCATGGGAGCCGGTGTTCAGACAAAGGATGCAGGCGGTGGCCGCCGGCGCGGACGGCGTCGGTCGCGCGCGCGCCCGAT GGCAGAGATCAACATCACGC
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MEAETLALAQEIDFSMWGLFARATLTVKLVMIMLIVASIWSWSIIIQKVITYRTARREAQVFERAFWSGNPLDELFEEIG AEPSGRSERIFAAGMIEWRRSHRTDGALIPGAQARIDRSMDVAISKESEGLQSGLQVLATIGSTTPFIGLFGTVWGIMNA FIEIAEQQNTNLAVVAPGIAEALLATGLGLLAAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQLDS
Sequences:
>Translated_231_residues MEAETLALAQEIDFSMWGLFARATLTVKLVMIMLIVASIWSWSIIIQKVITYRTARREAQVFERAFWSGNPLDELFEEIG AEPSGRSERIFAAGMIEWRRSHRTDGALIPGAQARIDRSMDVAISKESEGLQSGLQVLATIGSTTPFIGLFGTVWGIMNA FIEIAEQQNTNLAVVAPGIAEALLATGLGLLAAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQLDS >Mature_231_residues MEAETLALAQEIDFSMWGLFARATLTVKLVMIMLIVASIWSWSIIIQKVITYRTARREAQVFERAFWSGNPLDELFEEIG AEPSGRSERIFAAGMIEWRRSHRTDGALIPGAQARIDRSMDVAISKESEGLQSGLQVLATIGSTTPFIGLFGTVWGIMNA FIEIAEQQNTNLAVVAPGIAEALLATGLGLLAAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQLDS
Specific function: Involved in the tonB-independent uptake of proteins [H]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exbB/tolQ family [H]
Homologues:
Organism=Escherichia coli, GI1786958, Length=222, Percent_Identity=44.1441441441441, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI1789381, Length=228, Percent_Identity=40.3508771929825, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002898 - InterPro: IPR014163 [H]
Pfam domain/function: PF01618 MotA_ExbB [H]
EC number: NA
Molecular weight: Translated: 25280; Mature: 25280
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAETLALAQEIDFSMWGLFARATLTVKLVMIMLIVASIWSWSIIIQKVITYRTARREAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFERAFWSGNPLDELFEEIGAEPSGRSERIFAAGMIEWRRSHRTDGALIPGAQARIDRSM HHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCH DVAISKESEGLQSGLQVLATIGSTTPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIA HHEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH EALLATGLGLLAAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQLDS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEAETLALAQEIDFSMWGLFARATLTVKLVMIMLIVASIWSWSIIIQKVITYRTARREAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFERAFWSGNPLDELFEEIGAEPSGRSERIFAAGMIEWRRSHRTDGALIPGAQARIDRSM HHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCH DVAISKESEGLQSGLQVLATIGSTTPFIGLFGTVWGIMNAFIEIAEQQNTNLAVVAPGIA HHEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHH EALLATGLGLLAAIPAVIFYNKLSADSDRIIGGYEAFADEFATIFSRQLDS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8955385; 10984043 [H]