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The map label for this gene is omp16 [H]

Identifier: 99082204

GI number: 99082204

Start: 2486156

End: 2486659

Strand: Reverse

Name: omp16 [H]

Synonym: TM1040_2364

Alternate gene names: 99082204

Gene position: 2486659-2486156 (Counterclockwise)

Preceding gene: 99082205

Following gene: 99082203

Centisome position: 77.69

GC content: 63.89

Gene sequence:

>504_bases
ATGAGCGGTATCAAGACAGCAATTCTACTGGTCGCGGGCCTCGCCCTTTCGGCCTGTTCCGACACGCGCTGGGACGACAC
CAGCGCGGGCAATGGCGGCTCCGGTATCGGAGTGGACGGCGGACTCGGGGACCCCTCGAGCCCTGCTTATTTCCGCGAGG
CCGTGGGCGACCGTGTCCTGTTCCTTGTAGATCAGTCCAGCATCTCTCCCGAGGCGCAGGTGATCCTCGATGGGCAGGCG
CGCTGGCTGCAGGCCAACCCAGCCTATGTTGTCACCATCGAAGGCCACGCCGACGAGCGAGGCACCCGCGAGTATAACCT
CGCCCTCGGTGCAAGCCGCGCGAACTCCGCACGTGATTATCTGATCTCCAAGGGTGTTGCTGCCAGCCGGATCCAGACGG
TGTCCTTTGGCAAGGAACGCCCGATCGAGATTTGCTCCGAACAGAGCTGTTATGAGAAGAACCGCCGTGCCGTGACCGTG
CTGGCCGGCGGCGCGCTGAGCTGA

Upstream 100 bases:

>100_bases
ACCGCCCGGCCAAGAACCACGCGTGCAAGCCCGTGGCGTGGCCGGGTACAATATGCTAACACTTCGGTAAGAAATGTCCG
AGCACACGAGGCGATTTCAC

Downstream 100 bases:

>100_bases
TCGACATGAGCGGTCTGCGGCAGATCTTGTTGGCGTCGGCGTTGGCAGTTGCCAGCGCCCTCCCAACCATGGCGCAGGAG
CGTGAACAGACCTTGGCGGA

Product: OmpA/MotB

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MSGIKTAILLVAGLALSACSDTRWDDTSAGNGGSGIGVDGGLGDPSSPAYFREAVGDRVLFLVDQSSISPEAQVILDGQA
RWLQANPAYVVTIEGHADERGTREYNLALGASRANSARDYLISKGVAASRIQTVSFGKERPIEICSEQSCYEKNRRAVTV
LAGGALS

Sequences:

>Translated_167_residues
MSGIKTAILLVAGLALSACSDTRWDDTSAGNGGSGIGVDGGLGDPSSPAYFREAVGDRVLFLVDQSSISPEAQVILDGQA
RWLQANPAYVVTIEGHADERGTREYNLALGASRANSARDYLISKGVAASRIQTVSFGKERPIEICSEQSCYEKNRRAVTV
LAGGALS
>Mature_166_residues
SGIKTAILLVAGLALSACSDTRWDDTSAGNGGSGIGVDGGLGDPSSPAYFREAVGDRVLFLVDQSSISPEAQVILDGQAR
WLQANPAYVVTIEGHADERGTREYNLALGASRANSARDYLISKGVAASRIQTVSFGKERPIEICSEQSCYEKNRRAVTVL
AGGALS

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=166, Percent_Identity=40.9638554216867, Blast_Score=120, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 17508; Mature: 17376

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGIKTAILLVAGLALSACSDTRWDDTSAGNGGSGIGVDGGLGDPSSPAYFREAVGDRVL
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEE
FLVDQSSISPEAQVILDGQARWLQANPAYVVTIEGHADERGTREYNLALGASRANSARDY
EEEECCCCCCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHH
LISKGVAASRIQTVSFGKERPIEICSEQSCYEKNRRAVTVLAGGALS
HHHCCCCHHHEEEECCCCCCCHHHHCCCHHHHCCCCEEEEEECCCCC
>Mature Secondary Structure 
SGIKTAILLVAGLALSACSDTRWDDTSAGNGGSGIGVDGGLGDPSSPAYFREAVGDRVL
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCEEE
FLVDQSSISPEAQVILDGQARWLQANPAYVVTIEGHADERGTREYNLALGASRANSARDY
EEEECCCCCCCEEEEECCCCEEEECCCCEEEEEECCCCCCCCEEEEEEEECCCCCCHHHH
LISKGVAASRIQTVSFGKERPIEICSEQSCYEKNRRAVTVLAGGALS
HHHCCCCHHHEEEECCCCCCCHHHHCCCHHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]