Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is yuaD [H]

Identifier: 99082199

GI number: 99082199

Start: 2480493

End: 2481074

Strand: Reverse

Name: yuaD [H]

Synonym: TM1040_2359

Alternate gene names: 99082199

Gene position: 2481074-2480493 (Counterclockwise)

Preceding gene: 99082200

Following gene: 99082198

Centisome position: 77.51

GC content: 62.2

Gene sequence:

>582_bases
ATGCCGGTATTACGCGAAACCCAATTCAGCGCAGAGATCACTTGGTTGGGGATGGTTCCCGCCGATACAGGTATTCAGGC
GCAGCCCCGCACTGAGTTGGATCTGCTGTTCAGTGGCGTCGCAGGCGAGCGGCACGAAGGGGCCCAGCGTCCCTCCTGTG
TGCGGGTCAAGAACCTCTATGTCCCCGGCACCGAGATCCGCAATACGCGCCAACTGACGATTCTCTCCGAAGAGGAACTC
GCGCTGATCGCGGCAGAGATGGGGCTTGAGGCGCTTGACCCGCGGTATCTCGGCGCAACAGTCGTGCTGCGCGGTATTCC
CGACCTGACCCACCTGCCGCCTGCGTCGCGCCTGCAGGGCAAAAATGGGGTCACGATCACCGTCGACATCGAGAATCGTC
CCTGCATCCTGCCCGGTCGCGAGATCGAGAAAGACCACACAGGCTTTGGCCCGAAATTTAAAACCGCCGCCGAAAATCGC
CGCGGCGTGACCGCTTGGGTCGAACGCCCCGGTCGGCTCGCTCTTGGTGATCAGATGCGTCTTTTTGTGCCCGACCAGCC
CGCTTGGGCGGCAGAGCGCTAA

Upstream 100 bases:

>100_bases
GGGTCAGAGACGACGCGCACGGGGCGGTCGGTCAATGGCTTGTTGCTCTTGAAACTTCGTCTAGACTGCCGACAAAATTT
GACAGCAGGACGTGAGCATC

Downstream 100 bases:

>100_bases
GGGTGCGACCCTCAGGCTTCGGTGTTAGCGATCAGCGTGCGAATACGAAGAGCGACGTTCTGGATCGCAATTATGTCGGA
AACCAATGGCGCGGTTTGTT

Product: MOSC domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MPVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLYVPGTEIRNTRQLTILSEEEL
ALIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQGKNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENR
RGVTAWVERPGRLALGDQMRLFVPDQPAWAAER

Sequences:

>Translated_193_residues
MPVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLYVPGTEIRNTRQLTILSEEEL
ALIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQGKNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENR
RGVTAWVERPGRLALGDQMRLFVPDQPAWAAER
>Mature_192_residues
PVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLYVPGTEIRNTRQLTILSEEELA
LIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQGKNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENRR
GVTAWVERPGRLALGDQMRLFVPDQPAWAAER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005302
- InterPro:   IPR015808
- InterPro:   IPR011037 [H]

Pfam domain/function: PF03473 MOSC [H]

EC number: NA

Molecular weight: Translated: 21299; Mature: 21168

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLY
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEE
VPGTEIRNTRQLTILSEEELALIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQG
CCCCCCCCCEEEEEECCCCEEEEHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCHHHCCC
KNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENRRGVTAWVERPGRLALGDQMR
CCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCEE
LFVPDQPAWAAER
EEECCCCCCCCCC
>Mature Secondary Structure 
PVLRETQFSAEITWLGMVPADTGIQAQPRTELDLLFSGVAGERHEGAQRPSCVRVKNLY
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEEE
VPGTEIRNTRQLTILSEEELALIAAEMGLEALDPRYLGATVVLRGIPDLTHLPPASRLQG
CCCCCCCCCEEEEEECCCCEEEEHHHCCHHHCCCCCCCEEEEEECCCCCCCCCCHHHCCC
KNGVTITVDIENRPCILPGREIEKDHTGFGPKFKTAAENRRGVTAWVERPGRLALGDQMR
CCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCEE
LFVPDQPAWAAER
EEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]