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The map label for this gene is smf [H]

Identifier: 99082178

GI number: 99082178

Start: 2458080

End: 2459228

Strand: Direct

Name: smf [H]

Synonym: TM1040_2338

Alternate gene names: 99082178

Gene position: 2458080-2459228 (Clockwise)

Preceding gene: 99082177

Following gene: 99082179

Centisome position: 76.79

GC content: 62.49

Gene sequence:

>1149_bases
ATGACCGGAGAAGCATATTCTTCCACTCACCCCCCACTCCCACCCACCACGGAAGATCAAAGGTATTCCTGGCTTCGCCT
GTTGCGCTCCCGAGGCATCGGGACCGTGACCTTTTATCGGCTTCTGGCCGAGTATGGTTCAGCACAGAATGTGCTTGAAA
AGCTGCCTGAATTGGCAGCGACTTCAGGCGTCAAAGGGTATAAAATATACTCAAAAGATGCATTGGACGCCGAGTTCGAG
AACGCAAAAGCCGCCAATGCGCGGCTTTTGTGCATTGGAGATCCCCATTATCCGGCCCCGTTGGCCTCGCTTCCCAATCC
TCCTCCGGCACTCTGGGCGATCGGAAATTTGTCGCTTGTGACGCGACCGGCCATTGCACTGGTGGGCGCACGCAACGCGT
CCTCCTTGGGGCGGCGCATGGCCTATGGGCTGGCGCGAGATCTGGGCGATGCCGGATATGTGGTGGTCTCGGGACTTGCG
CGCGGCATCGATGCCTGTGCCCACGAGGGTGCCCTTGCCAGCGGCACCATCGCTGTGCAGGGCGGCGGCGTCGACATTAT
ATATCCCTCTGAGAACACCCCGCTCGCCATGACCCTTGCCGAGCAGGGTCTGCGCCTCTCCGAACAACCCATGGGCTTGC
AGCCACAAGCGCGCCATTTTCCGCCCCGCAACCGCATCATAGCAGGTCTCGCCCTTGCAACAGTGGTCGTGGAGGCCGCC
ATAAAGTCAGGGAGCCTCATCACTGCGCGCGATGCGCTGGATTTGGGACGGGACGTGATGGCAGTACCTGGCCACCCCTG
CGACGGGCGGGCCAGCGGTGGCAACCTCTTGATCCGCGATGGCGCCACGCTGGTGCGCCACGCCGAGGACGTGATCGAGG
CGCTACCTCCGCTCAATGCGCACCGCCCGCCCCAACGCCCCTCGGTGCAGGACCTGCCCTCGCCCCCGCCCGAGCGACGC
AACCTGCGTCAAACCGCAGCACTGCATCAACAAATCCTGGATCGCCTCGCGGCCGCGCCCACACCGGAAGGCCAGTTGAT
CAAGGATCTCGGCAGCCCCGCACGCAAGGTGCGCACGGTGCTGACGGACTTGGAGCTATCCGGCGAAATCGGTCGGGAAC
CGGGTGGAGTGATCATCAAAAAACGCTAA

Upstream 100 bases:

>100_bases
GCAAAAAGTACCGAAAAATCTCGATAAACTTTTGGGATGTTCACCACCTGTTAACCCCTCAGGCCTTAATCCTAATATTG
CAACAAGGCGAGGCGAGGGC

Downstream 100 bases:

>100_bases
TTCAAAGTCGAAAACTCCCCCCTTCACGCCCGAGCTCCACGCGCTGATTTCTTCGCGTGGATTGACATTCTCCCCTTGCG
CGACACATTTTGCCCGGCCA

Product: DNA processing protein DprA, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MTGEAYSSTHPPLPPTTEDQRYSWLRLLRSRGIGTVTFYRLLAEYGSAQNVLEKLPELAATSGVKGYKIYSKDALDAEFE
NAKAANARLLCIGDPHYPAPLASLPNPPPALWAIGNLSLVTRPAIALVGARNASSLGRRMAYGLARDLGDAGYVVVSGLA
RGIDACAHEGALASGTIAVQGGGVDIIYPSENTPLAMTLAEQGLRLSEQPMGLQPQARHFPPRNRIIAGLALATVVVEAA
IKSGSLITARDALDLGRDVMAVPGHPCDGRASGGNLLIRDGATLVRHAEDVIEALPPLNAHRPPQRPSVQDLPSPPPERR
NLRQTAALHQQILDRLAAAPTPEGQLIKDLGSPARKVRTVLTDLELSGEIGREPGGVIIKKR

Sequences:

>Translated_382_residues
MTGEAYSSTHPPLPPTTEDQRYSWLRLLRSRGIGTVTFYRLLAEYGSAQNVLEKLPELAATSGVKGYKIYSKDALDAEFE
NAKAANARLLCIGDPHYPAPLASLPNPPPALWAIGNLSLVTRPAIALVGARNASSLGRRMAYGLARDLGDAGYVVVSGLA
RGIDACAHEGALASGTIAVQGGGVDIIYPSENTPLAMTLAEQGLRLSEQPMGLQPQARHFPPRNRIIAGLALATVVVEAA
IKSGSLITARDALDLGRDVMAVPGHPCDGRASGGNLLIRDGATLVRHAEDVIEALPPLNAHRPPQRPSVQDLPSPPPERR
NLRQTAALHQQILDRLAAAPTPEGQLIKDLGSPARKVRTVLTDLELSGEIGREPGGVIIKKR
>Mature_381_residues
TGEAYSSTHPPLPPTTEDQRYSWLRLLRSRGIGTVTFYRLLAEYGSAQNVLEKLPELAATSGVKGYKIYSKDALDAEFEN
AKAANARLLCIGDPHYPAPLASLPNPPPALWAIGNLSLVTRPAIALVGARNASSLGRRMAYGLARDLGDAGYVVVSGLAR
GIDACAHEGALASGTIAVQGGGVDIIYPSENTPLAMTLAEQGLRLSEQPMGLQPQARHFPPRNRIIAGLALATVVVEAAI
KSGSLITARDALDLGRDVMAVPGHPCDGRASGGNLLIRDGATLVRHAEDVIEALPPLNAHRPPQRPSVQDLPSPPPERRN
LRQTAALHQQILDRLAAAPTPEGQLIKDLGSPARKVRTVLTDLELSGEIGREPGGVIIKKR

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=323, Percent_Identity=35.2941176470588, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 40518; Mature: 40387

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEAYSSTHPPLPPTTEDQRYSWLRLLRSRGIGTVTFYRLLAEYGSAQNVLEKLPELAA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
TSGVKGYKIYSKDALDAEFENAKAANARLLCIGDPHYPAPLASLPNPPPALWAIGNLSLV
HCCCCCEEEECCCCCCCHHCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCEEEECCCHHH
TRPAIALVGARNASSLGRRMAYGLARDLGDAGYVVVSGLARGIDACAHEGALASGTIAVQ
HCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
GGGVDIIYPSENTPLAMTLAEQGLRLSEQPMGLQPQARHFPPRNRIIAGLALATVVVEAA
CCCEEEEECCCCCCEEEEEHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
IKSGSLITARDALDLGRDVMAVPGHPCDGRASGGNLLIRDGATLVRHAEDVIEALPPLNA
HCCCCEEEEHHHHHCCCCEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCC
HRPPQRPSVQDLPSPPPERRNLRQTAALHQQILDRLAAAPTPEGQLIKDLGSPARKVRTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHH
LTDLELSGEIGREPGGVIIKKR
HHHHHHCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TGEAYSSTHPPLPPTTEDQRYSWLRLLRSRGIGTVTFYRLLAEYGSAQNVLEKLPELAA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
TSGVKGYKIYSKDALDAEFENAKAANARLLCIGDPHYPAPLASLPNPPPALWAIGNLSLV
HCCCCCEEEECCCCCCCHHCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCEEEECCCHHH
TRPAIALVGARNASSLGRRMAYGLARDLGDAGYVVVSGLARGIDACAHEGALASGTIAVQ
HCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
GGGVDIIYPSENTPLAMTLAEQGLRLSEQPMGLQPQARHFPPRNRIIAGLALATVVVEAA
CCCEEEEECCCCCCEEEEEHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHH
IKSGSLITARDALDLGRDVMAVPGHPCDGRASGGNLLIRDGATLVRHAEDVIEALPPLNA
HCCCCEEEEHHHHHCCCCEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCC
HRPPQRPSVQDLPSPPPERRNLRQTAALHQQILDRLAAAPTPEGQLIKDLGSPARKVRTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHH
LTDLELSGEIGREPGGVIIKKR
HHHHHHCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]