| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is nadD [H]
Identifier: 99082098
GI number: 99082098
Start: 2372850
End: 2373452
Strand: Direct
Name: nadD [H]
Synonym: TM1040_2258
Alternate gene names: 99082098
Gene position: 2372850-2373452 (Clockwise)
Preceding gene: 99082097
Following gene: 99082099
Centisome position: 74.13
GC content: 64.01
Gene sequence:
>603_bases ATGAGACATGCGTACCCGTATCTTGCGCCCGGTATGACCGTGGGCCTTCTGGGAGGATCCTTCGATCCGCCACACGAAGG CCATGTGCAGATCTCGCGCGCCGCGCTCAAACGCTTCGACCTTGATCAGCTCTGGTGGCTGGTGACACCCGGCAATCCGC TAAAGGAAAACCCGCCTGCCTCCATGACCCGCCGTATCAAGGCCGCGCGCGAGATCATGGATCATCCGCGCGTGCGCATC AGTGACATCGAGGCGCGGCTCAACACCCGATACACCGCGCAAACCCTGCGCGAGCTGCGCAAACTCTATCCACAGGTCCG GTTTGTCTGGCTGATGGGGGCGGACAACCTTGCACATTTTCACCGCTGGAAGAACTGGCGCGGCATCATGGAAAGCGTTC CCGTAGGCGTCCTCGCCCGCCCCGGCGACCGGATCTCGGCCCGGCTCTCGCGCGCGGCGCGCATCTACAGCCAGCACCGC ATTCCCGCCGGGCAAAGTCACCTCCTGGCGCGCGCGTCCTCCCCGGCCTGGTGCTTCTTGAACGTGCCGATGACAAAGGC CTCTTCGACCGAAATTCGCAAGCGCGGAGCGTGGACAGGCTAG
Upstream 100 bases:
>100_bases TTTACTCGGTTTCGCGCGCATGACGCACCACACGGCATAGCCTCCCAGAGCGTATGCTAACCGTTGCCTTCCCCTGCCAA ATCTGCGCATCAATCCCTGG
Downstream 100 bases:
>100_bases AGCTGCGCCGTCGAAGCGACACGTCACATAAACTTCTTGCTGGCAAACCATCAAAGCATTTGCGCTCTGTTCGGGAATTT GCTCCAAAATACTCAATATG
Product: nicotinic acid mononucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MRHAYPYLAPGMTVGLLGGSFDPPHEGHVQISRAALKRFDLDQLWWLVTPGNPLKENPPASMTRRIKAAREIMDHPRVRI SDIEARLNTRYTAQTLRELRKLYPQVRFVWLMGADNLAHFHRWKNWRGIMESVPVGVLARPGDRISARLSRAARIYSQHR IPAGQSHLLARASSPAWCFLNVPMTKASSTEIRKRGAWTG
Sequences:
>Translated_200_residues MRHAYPYLAPGMTVGLLGGSFDPPHEGHVQISRAALKRFDLDQLWWLVTPGNPLKENPPASMTRRIKAAREIMDHPRVRI SDIEARLNTRYTAQTLRELRKLYPQVRFVWLMGADNLAHFHRWKNWRGIMESVPVGVLARPGDRISARLSRAARIYSQHR IPAGQSHLLARASSPAWCFLNVPMTKASSTEIRKRGAWTG >Mature_200_residues MRHAYPYLAPGMTVGLLGGSFDPPHEGHVQISRAALKRFDLDQLWWLVTPGNPLKENPPASMTRRIKAAREIMDHPRVRI SDIEARLNTRYTAQTLRELRKLYPQVRFVWLMGADNLAHFHRWKNWRGIMESVPVGVLARPGDRISARLSRAARIYSQHR IPAGQSHLLARASSPAWCFLNVPMTKASSTEIRKRGAWTG
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 22807; Mature: 22807
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHAYPYLAPGMTVGLLGGSFDPPHEGHVQISRAALKRFDLDQLWWLVTPGNPLKENPPA CCCCCCCCCCCCEEEECCCCCCCCCCCCEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCH SMTRRIKAAREIMDHPRVRISDIEARLNTRYTAQTLRELRKLYPQVRFVWLMGADNLAHF HHHHHHHHHHHHHHCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHH HRWKNWRGIMESVPVGVLARPGDRISARLSRAARIYSQHRIPAGQSHLLARASSPAWCFL HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCEEEE NVPMTKASSTEIRKRGAWTG ECCCCCCCHHHHHHCCCCCC >Mature Secondary Structure MRHAYPYLAPGMTVGLLGGSFDPPHEGHVQISRAALKRFDLDQLWWLVTPGNPLKENPPA CCCCCCCCCCCCEEEECCCCCCCCCCCCEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCH SMTRRIKAAREIMDHPRVRISDIEARLNTRYTAQTLRELRKLYPQVRFVWLMGADNLAHF HHHHHHHHHHHHHHCCCEEEEHHHHHHCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHH HRWKNWRGIMESVPVGVLARPGDRISARLSRAARIYSQHRIPAGQSHLLARASSPAWCFL HHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCEEEE NVPMTKASSTEIRKRGAWTG ECCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA