Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is gstA [H]

Identifier: 99082085

GI number: 99082085

Start: 2359730

End: 2360392

Strand: Reverse

Name: gstA [H]

Synonym: TM1040_2245

Alternate gene names: 99082085

Gene position: 2360392-2359730 (Counterclockwise)

Preceding gene: 99082086

Following gene: 99082084

Centisome position: 73.74

GC content: 63.5

Gene sequence:

>663_bases
ATGAACGCCGAATTTGCCTCCTCCTCCGCACCGATCAAACTCTATCGCCACCCGCTCTCGGGGCATTGTCACCGGGTCGA
GATGATGCTCTCGATCCTCGATCTGCCCTATGAGTTGGTCGACCTCGACCTGCTGCAGGGCGCGCATAAGGCGCCCGCGT
TCCTGGATCTCAACCCGTTTGGGCAGGTTCCAGTTCTGGACGACAACGGCACCATCGTCAGCGATTCCAATGCGATCCTT
GTCTATCTTGTCGAGGCCTACGGCAAAGAGACGGGTTGGTTGCCCCGCGCGCCCGGTGTGGCCGCCGCAGTTCAGCGCTG
GCTGTCGCTTACGGTATCGCATCTGGCAACCGGTCCCGCGCGGGCGCGTTGGCGGACCCTGACCGGCGCGAGCGACACGC
CGGAAACGGAGACAGCGCGTGCCATCAGCCATGCCTTTCTGGAGCAGATGGAAGGTCTGATCTCGGGTCAGCACTACCTG
GCAGGAGAGGCGCCTACGATCGCGGATGTGTCTGCCTACGCCTATATCGCACACGCGCCCGAGGGAGGTGTGAGCCTTGC
GGCCTATCCAAAGGTACGGGCGTGGATCGATCGGGTCGAAGCGCTTCAGGGGTTTGTGCCGATGCAGGCCTCCCCGCTGC
CAGAGCTTGCGCGAGGCGCCTGA

Upstream 100 bases:

>100_bases
GGCGTCGTCCTGACGACCATCCGGGCCTCAGCGACCTTGGCCTCTGAGCCACGACTTTCCCGACAGATTGACCTCACAGA
TAGACCTCAAGGATACCCAA

Downstream 100 bases:

>100_bases
GATGTCCCGCTCTGAGCAGGTTTTCCACGCAGGCGAATTGATCCTGCAAAACCGCGCCGGTGTCGCGCCAAGCTATCGCG
AGCGGGTGGCCCATGCCATC

Product: glutathione S-transferase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MNAEFASSSAPIKLYRHPLSGHCHRVEMMLSILDLPYELVDLDLLQGAHKAPAFLDLNPFGQVPVLDDNGTIVSDSNAIL
VYLVEAYGKETGWLPRAPGVAAAVQRWLSLTVSHLATGPARARWRTLTGASDTPETETARAISHAFLEQMEGLISGQHYL
AGEAPTIADVSAYAYIAHAPEGGVSLAAYPKVRAWIDRVEALQGFVPMQASPLPELARGA

Sequences:

>Translated_220_residues
MNAEFASSSAPIKLYRHPLSGHCHRVEMMLSILDLPYELVDLDLLQGAHKAPAFLDLNPFGQVPVLDDNGTIVSDSNAIL
VYLVEAYGKETGWLPRAPGVAAAVQRWLSLTVSHLATGPARARWRTLTGASDTPETETARAISHAFLEQMEGLISGQHYL
AGEAPTIADVSAYAYIAHAPEGGVSLAAYPKVRAWIDRVEALQGFVPMQASPLPELARGA
>Mature_220_residues
MNAEFASSSAPIKLYRHPLSGHCHRVEMMLSILDLPYELVDLDLLQGAHKAPAFLDLNPFGQVPVLDDNGTIVSDSNAIL
VYLVEAYGKETGWLPRAPGVAAAVQRWLSLTVSHLATGPARARWRTLTGASDTPETETARAISHAFLEQMEGLISGQHYL
AGEAPTIADVSAYAYIAHAPEGGVSLAAYPKVRAWIDRVEALQGFVPMQASPLPELARGA

Specific function: Unknown

COG id: COG0625

COG function: function code O; Glutathione S-transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI167466164, Length=203, Percent_Identity=29.064039408867, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI4504187, Length=177, Percent_Identity=29.3785310734463, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI124249394, Length=177, Percent_Identity=29.3785310734463, Blast_Score=74, Evalue=9e-14,
Organism=Escherichia coli, GI1788640, Length=205, Percent_Identity=28.780487804878, Blast_Score=64, Evalue=6e-12,
Organism=Drosophila melanogaster, GI19922526, Length=209, Percent_Identity=33.4928229665072, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI19922532, Length=181, Percent_Identity=32.5966850828729, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI17864592, Length=212, Percent_Identity=30.188679245283, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI28571670, Length=175, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI17864598, Length=191, Percent_Identity=27.7486910994764, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI85725204, Length=192, Percent_Identity=29.1666666666667, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI17737923, Length=192, Percent_Identity=29.1666666666667, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24646259, Length=192, Percent_Identity=29.1666666666667, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45549270, Length=184, Percent_Identity=29.3478260869565, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI221378983, Length=192, Percent_Identity=29.1666666666667, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI17864594, Length=189, Percent_Identity=30.1587301587302, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19922528, Length=195, Percent_Identity=31.2820512820513, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI20130123, Length=202, Percent_Identity=32.6732673267327, Blast_Score=81, Evalue=5e-16,
Organism=Drosophila melanogaster, GI19922932, Length=197, Percent_Identity=33.502538071066, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI20130115, Length=180, Percent_Identity=30, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24654965, Length=182, Percent_Identity=32.967032967033, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24654975, Length=188, Percent_Identity=31.3829787234043, Blast_Score=77, Evalue=6e-15,
Organism=Drosophila melanogaster, GI17864596, Length=185, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24654992, Length=179, Percent_Identity=31.2849162011173, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24646251, Length=192, Percent_Identity=27.0833333333333, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24654983, Length=180, Percent_Identity=29.4444444444444, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI17933730, Length=187, Percent_Identity=26.2032085561497, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24654996, Length=183, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221378141, Length=181, Percent_Identity=25.414364640884, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24654979, Length=181, Percent_Identity=28.1767955801105, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24646249, Length=192, Percent_Identity=26.0416666666667, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI62472445, Length=151, Percent_Identity=28.476821192053, Blast_Score=67, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: NA

Molecular weight: Translated: 23651; Mature: 23651

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEFASSSAPIKLYRHPLSGHCHRVEMMLSILDLPYELVDLDLLQGAHKAPAFLDLNPF
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCC
GQVPVLDDNGTIVSDSNAILVYLVEAYGKETGWLPRAPGVAAAVQRWLSLTVSHLATGPA
CCCEEECCCCCEEECCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
RARWRTLTGASDTPETETARAISHAFLEQMEGLISGQHYLAGEAPTIADVSAYAYIAHAP
HHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHEEEEEECC
EGGVSLAAYPKVRAWIDRVEALQGFVPMQASPLPELARGA
CCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MNAEFASSSAPIKLYRHPLSGHCHRVEMMLSILDLPYELVDLDLLQGAHKAPAFLDLNPF
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEECCCC
GQVPVLDDNGTIVSDSNAILVYLVEAYGKETGWLPRAPGVAAAVQRWLSLTVSHLATGPA
CCCEEECCCCCEEECCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
RARWRTLTGASDTPETETARAISHAFLEQMEGLISGQHYLAGEAPTIADVSAYAYIAHAP
HHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHEEEEEECC
EGGVSLAAYPKVRAWIDRVEALQGFVPMQASPLPELARGA
CCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA