| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is paaG [H]
Identifier: 99082080
GI number: 99082080
Start: 2354147
End: 2354950
Strand: Reverse
Name: paaG [H]
Synonym: TM1040_2240
Alternate gene names: 99082080
Gene position: 2354950-2354147 (Counterclockwise)
Preceding gene: 99082081
Following gene: 99082079
Centisome position: 73.57
GC content: 60.45
Gene sequence:
>804_bases ATGAGCCTCGATGAGACAACGCATTTCAATTGCACGATTGAGGGCGGCATCGCGCGTATCTCGCTCAATCGGCCGGAGCG TAAGAACCCGCTGACCTTTGAAAGCTACGCAGAGCTGCGCGACTGGTTCCGGGCGTTGCCCTATTCGGACGAGGTGCATG CGGTTGTGATCGTGCCCAATGGCGGGAATTTTTCCTCTGGCGGGGATGTGCACGACATCATCGGCCCGCTCACCAGGATG AACATGAAAGAGCTCTTGGCCTTCACCCGCATGACCGGGGATCTTGTGAAGGCGATGCTCAACTGCAGCAAGCCGGTGAT TTCGGCGGTGGATGGCATTTGTGCGGGGGCAGGGGCGATCATAGCGATGGCCAGTGATCTGCGCATCGCCACACCTGAGG CCAAGGTGGCGTTTCTCTTTAATCGTGTGGGGCTTGCGGGTTGTGACATGGGCGCTTGCGCCATGCTGCCGCGTATCATC GGACAGGGCCGCGCGGCGGAGCTGCTTTATATGGGTCGGTCGCTGGGCGCCGAGGAAGGCGAACGCTGGGGGTTTTTTAA CCGGCTCGCGTCCGCTGAGGCGCTGGAAGCCGAAGCCATGAAGATGGCAGAGCGCATCGTTGAGGGGCCGACCTTTGCCA ATGGCATGACCAAGACGATGCTGGCGCAAGAATGGTCCATGAGCCTTGAGCAGGCGATTGAGGCCGAGGCGCAGGCGCAG GCGATCTGCATGCAGGGCAATGATTTCCGCCGCGCCTATGAGGCCTTCGTCGCGAAAGAGCGACCAGTGTTTGAAGGCGA CTGA
Upstream 100 bases:
>100_bases GATGGCGGGGCTTGGCGCAGATGAAATCACCGAAATGAGCGCGCTTCTGGACCAGATCCAGCCGGTTGCGGCGCCCCAAG AAGACAAAGGATGACCCGAC
Downstream 100 bases:
>100_bases GAGCGCCGAATTTCGCCTTCGGCGAGGATATTTGACAAGAAGATGAAGACAACGGGGAAGATAACGTGGCGGACCAGAGT TTTCTGAATTGGCCCTTTTT
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSLDETTHFNCTIEGGIARISLNRPERKNPLTFESYAELRDWFRALPYSDEVHAVVIVPNGGNFSSGGDVHDIIGPLTRM NMKELLAFTRMTGDLVKAMLNCSKPVISAVDGICAGAGAIIAMASDLRIATPEAKVAFLFNRVGLAGCDMGACAMLPRII GQGRAAELLYMGRSLGAEEGERWGFFNRLASAEALEAEAMKMAERIVEGPTFANGMTKTMLAQEWSMSLEQAIEAEAQAQ AICMQGNDFRRAYEAFVAKERPVFEGD
Sequences:
>Translated_267_residues MSLDETTHFNCTIEGGIARISLNRPERKNPLTFESYAELRDWFRALPYSDEVHAVVIVPNGGNFSSGGDVHDIIGPLTRM NMKELLAFTRMTGDLVKAMLNCSKPVISAVDGICAGAGAIIAMASDLRIATPEAKVAFLFNRVGLAGCDMGACAMLPRII GQGRAAELLYMGRSLGAEEGERWGFFNRLASAEALEAEAMKMAERIVEGPTFANGMTKTMLAQEWSMSLEQAIEAEAQAQ AICMQGNDFRRAYEAFVAKERPVFEGD >Mature_266_residues SLDETTHFNCTIEGGIARISLNRPERKNPLTFESYAELRDWFRALPYSDEVHAVVIVPNGGNFSSGGDVHDIIGPLTRMN MKELLAFTRMTGDLVKAMLNCSKPVISAVDGICAGAGAIIAMASDLRIATPEAKVAFLFNRVGLAGCDMGACAMLPRIIG QGRAAELLYMGRSLGAEEGERWGFFNRLASAEALEAEAMKMAERIVEGPTFANGMTKTMLAQEWSMSLEQAIEAEAQAQA ICMQGNDFRRAYEAFVAKERPVFEGD
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI20127408, Length=239, Percent_Identity=25.9414225941423, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI70995211, Length=251, Percent_Identity=26.2948207171315, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI31542718, Length=252, Percent_Identity=23.4126984126984, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI68989263, Length=201, Percent_Identity=28.3582089552239, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI194097323, Length=252, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1787660, Length=258, Percent_Identity=31.3953488372093, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI221142681, Length=280, Percent_Identity=26.0714285714286, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1788597, Length=202, Percent_Identity=26.7326732673267, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1787659, Length=248, Percent_Identity=24.1935483870968, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1790281, Length=197, Percent_Identity=22.8426395939086, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1788682, Length=225, Percent_Identity=27.1111111111111, Blast_Score=62, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17560910, Length=197, Percent_Identity=28.4263959390863, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17534483, Length=257, Percent_Identity=27.2373540856031, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI25145438, Length=253, Percent_Identity=26.0869565217391, Blast_Score=80, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17540714, Length=227, Percent_Identity=25.9911894273128, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17536985, Length=218, Percent_Identity=25.6880733944954, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17535521, Length=263, Percent_Identity=24.3346007604563, Blast_Score=78, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17554946, Length=253, Percent_Identity=25.6916996047431, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17540306, Length=251, Percent_Identity=22.3107569721116, Blast_Score=64, Evalue=6e-11, Organism=Drosophila melanogaster, GI19920382, Length=265, Percent_Identity=26.7924528301887, Blast_Score=95, Evalue=4e-20, Organism=Drosophila melanogaster, GI24653139, Length=257, Percent_Identity=26.0700389105058, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI21357171, Length=203, Percent_Identity=27.5862068965517, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24654903, Length=251, Percent_Identity=25.8964143426295, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI20129971, Length=247, Percent_Identity=24.6963562753036, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24653477, Length=247, Percent_Identity=24.6963562753036, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650670, Length=194, Percent_Identity=25.2577319587629, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 29057; Mature: 28926
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDETTHFNCTIEGGIARISLNRPERKNPLTFESYAELRDWFRALPYSDEVHAVVIVPN CCCCCCCEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC GGNFSSGGDVHDIIGPLTRMNMKELLAFTRMTGDLVKAMLNCSKPVISAVDGICAGAGAI CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHH IAMASDLRIATPEAKVAFLFNRVGLAGCDMGACAMLPRIIGQGRAAELLYMGRSLGAEEG HEEECCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC ERWGFFNRLASAEALEAEAMKMAERIVEGPTFANGMTKTMLAQEWSMSLEQAIEAEAQAQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AICMQGNDFRRAYEAFVAKERPVFEGD HHEECCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLDETTHFNCTIEGGIARISLNRPERKNPLTFESYAELRDWFRALPYSDEVHAVVIVPN CCCCCCEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC GGNFSSGGDVHDIIGPLTRMNMKELLAFTRMTGDLVKAMLNCSKPVISAVDGICAGAGAI CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHH IAMASDLRIATPEAKVAFLFNRVGLAGCDMGACAMLPRIIGQGRAAELLYMGRSLGAEEG HEEECCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC ERWGFFNRLASAEALEAEAMKMAERIVEGPTFANGMTKTMLAQEWSMSLEQAIEAEAQAQ CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AICMQGNDFRRAYEAFVAKERPVFEGD HHEECCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]