| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99082072
Identifier: 99082072
GI number: 99082072
Start: 2346354
End: 2346758
Strand: Reverse
Name: 99082072
Synonym: TM1040_2232
Alternate gene names: NA
Gene position: 2346758-2346354 (Counterclockwise)
Preceding gene: 99082073
Following gene: 99082071
Centisome position: 73.31
GC content: 55.8
Gene sequence:
>405_bases ATGTATGAGATGCCACAGAAAGTATTGTTCAAACATTGCGACCCGGCGGGGATTGTCTTTTTCCCCCGCTACTTCGAGAT GATGAACGATTGTGTCGAGAGCTGGTTTACCGATGTTCTTGGCTGGCCCTTTGAGGACATGCATCAAACCGCAGGTGTGC CCACGGCAAACATCCAGACCCGCTTTTCCGCGCCCAGTCGTCACGGGGATCATCTGGTCCTGCGCCTTCGTGTCACGCGG CTGGGGACGTCTTCGCTGACCTACGAGATGACCGCACATTGTGGCGAGGAGCTGCGGTTTTCGACGGAAACAACCCTGGT GCATATCAATGCCGAGGGGCGCTCAGCGCCCTGGCCCGCACCGATCCGAACCAAAATTGAGAATGAGATGAAAGGGCAGA TATGA
Upstream 100 bases:
>100_bases CGACCGCGCCGTGGTGCTGGAGCGCGGCAAGACCGTCTGGAGCGGTGCCATGGCGGCGCTGACCCCGGACATCAGCGAAC GCTACGTGGGGGTCTGAGCC
Downstream 100 bases:
>100_bases CCCATAAAACCATCCACCCCGAAGGTTGGGCACCGGCCAAAGGCTATGCCAATGGCATGCTGACCCATGACGGCGTGCTG CATATTGGCGGCCAGATCGG
Product: thioesterase superfamily protein
Products: 4-hydroxybenzoate; CoA
Alternate protein names: 4-Hydroxybenzoyl CoA Thioesterase; Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase Protein; Thioesterase Superfamily; 4-Hydroxybenzoyl-CoA Thioesterase Family Protein; Thioesterase Family Protein
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MYEMPQKVLFKHCDPAGIVFFPRYFEMMNDCVESWFTDVLGWPFEDMHQTAGVPTANIQTRFSAPSRHGDHLVLRLRVTR LGTSSLTYEMTAHCGEELRFSTETTLVHINAEGRSAPWPAPIRTKIENEMKGQI
Sequences:
>Translated_134_residues MYEMPQKVLFKHCDPAGIVFFPRYFEMMNDCVESWFTDVLGWPFEDMHQTAGVPTANIQTRFSAPSRHGDHLVLRLRVTR LGTSSLTYEMTAHCGEELRFSTETTLVHINAEGRSAPWPAPIRTKIENEMKGQI >Mature_134_residues MYEMPQKVLFKHCDPAGIVFFPRYFEMMNDCVESWFTDVLGWPFEDMHQTAGVPTANIQTRFSAPSRHGDHLVLRLRVTR LGTSSLTYEMTAHCGEELRFSTETTLVHINAEGRSAPWPAPIRTKIENEMKGQI
Specific function: Unknown
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.2.23
Molecular weight: Translated: 15390; Mature: 15390
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEMPQKVLFKHCDPAGIVFFPRYFEMMNDCVESWFTDVLGWPFEDMHQTAGVPTANIQT CCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEE RFSAPSRHGDHLVLRLRVTRLGTSSLTYEMTAHCGEELRFSTETTLVHINAEGRSAPWPA EECCCCCCCCEEEEEEEEECCCCCCCEEHHHHHCCCCCEECCCEEEEEEECCCCCCCCCC PIRTKIENEMKGQI CHHHHHHHHCCCCC >Mature Secondary Structure MYEMPQKVLFKHCDPAGIVFFPRYFEMMNDCVESWFTDVLGWPFEDMHQTAGVPTANIQT CCCCCHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCEE RFSAPSRHGDHLVLRLRVTRLGTSSLTYEMTAHCGEELRFSTETTLVHINAEGRSAPWPA EECCCCCCCCEEEEEEEEECCCCCCCEEHHHHHCCCCCEECCCEEEEEEECCCCCCCCCC PIRTKIENEMKGQI CHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-hydroxybenzoyl-CoA; H2O
Specific reaction: 4-hydroxybenzoyl-CoA + H2O = 4-hydroxybenzoate + CoA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA