Click here to switch to the map view.

The map label for this gene is 99082022

Identifier: 99082022

GI number: 99082022

Start: 2292577

End: 2293533

Strand: Reverse

Name: 99082022

Synonym: TM1040_2182

Alternate gene names: NA

Gene position: 2293533-2292577 (Counterclockwise)

Preceding gene: 99082023

Following gene: 99082021

Centisome position: 71.65

GC content: 59.35

Gene sequence:

>957_bases
TTGCTGGAGGTCCCGCCCGCGATCGACGTCGCCGAAGCAGAGGCCAGAGCGGTCCTGCCCAAACATCCGGAATGGGGAAC
TTTCCTCCTGATTGTGGCTTGCTATCTCCTTTGGGCAGGCGCTCTCTTTGGTCTGGCGCAGGTATCGCAGGCTCTGGCCG
TCGTGGCGGCGGGGCTAATGGTGGCGTTGCATTCCTCGCTCTGCCATGAGGTGTTGCACGGGCACCCCTTTGCGAGGCGC
GCGCTTAACGAGGCGCTGGTGTTTTTGCCGCTCAATCTTTGTGTGCCCTATGGCCGGTTTCGCGACACGCATCTTGCGCA
CCACCAGGATGAAAACCTCACCGATCCCTATGATGATCCCGAGAGCAATTTCATGGATCCGGAGATCTGGGCGCGCCTGC
CAAAATGGCGACAGAGCCTCTTGCGTGTGAACAATACGCTTCTGGGGCGCATACTCTTGGGGCCAATGATCGGGCAGATC
TGCTTTATGCAGACGGACTGGCGGTTGGCACGCAATGGTGTGTGCGGGATCGGACGCGATTGGCTGCTGCACGGGATCGG
AATCCTGTTGGTCTTGGGGATCGTGAGCCTCTCGGAGATGTCGGTTCTTGCCTATCTGGGCGCTGCCTACATCGGACTGG
CATTGCTCAAGATCCGTACCTATCTGGAACACCGTGCCCATGAGGACATGCACGGCCGCACGGCAATCGTGGAGGGACGG
GGAGTGCTCGGCTGGATCCTGAGTTTTCTGTTCCTGAACAACAATCTCCATATTGTGCATCATCTCTATCCCGGCGTACC
GTGGCACCGGTTGCCCCGGCTTTATCGTCAGCACCGCGCGCGCTTTCAGGACCGGAATGACGGCTATGTGCTGCCCAGCT
ATGCGAGCGTGTTTCGCCAGTTTGCCTTTCGCGCCAAAGACCCGGTGCCACATCCGCTCTGGAAATCCTCCGAGTAA

Upstream 100 bases:

>100_bases
GTTTGGGCGGGCATCCGCTGGGGACGTCACCATGCATGACATGAGTGCCATGCAACCGGCATCAAGGACAGCCGAGAGCG
CGATCGGGATGCCCGAGAAC

Downstream 100 bases:

>100_bases
AGGCGCATAAGGGCGGTATGCGATAGTATACCATAAGGTCAGCCCATGCCGCTCTGGATCCCCGTCACCCTCGCCGCTGC
CAGTTTTCAGACCGTGCGCT

Product: fatty acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Beta-Carotene Ketolase

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MLEVPPAIDVAEAEARAVLPKHPEWGTFLLIVACYLLWAGALFGLAQVSQALAVVAAGLMVALHSSLCHEVLHGHPFARR
ALNEALVFLPLNLCVPYGRFRDTHLAHHQDENLTDPYDDPESNFMDPEIWARLPKWRQSLLRVNNTLLGRILLGPMIGQI
CFMQTDWRLARNGVCGIGRDWLLHGIGILLVLGIVSLSEMSVLAYLGAAYIGLALLKIRTYLEHRAHEDMHGRTAIVEGR
GVLGWILSFLFLNNNLHIVHHLYPGVPWHRLPRLYRQHRARFQDRNDGYVLPSYASVFRQFAFRAKDPVPHPLWKSSE

Sequences:

>Translated_318_residues
MLEVPPAIDVAEAEARAVLPKHPEWGTFLLIVACYLLWAGALFGLAQVSQALAVVAAGLMVALHSSLCHEVLHGHPFARR
ALNEALVFLPLNLCVPYGRFRDTHLAHHQDENLTDPYDDPESNFMDPEIWARLPKWRQSLLRVNNTLLGRILLGPMIGQI
CFMQTDWRLARNGVCGIGRDWLLHGIGILLVLGIVSLSEMSVLAYLGAAYIGLALLKIRTYLEHRAHEDMHGRTAIVEGR
GVLGWILSFLFLNNNLHIVHHLYPGVPWHRLPRLYRQHRARFQDRNDGYVLPSYASVFRQFAFRAKDPVPHPLWKSSE
>Mature_318_residues
MLEVPPAIDVAEAEARAVLPKHPEWGTFLLIVACYLLWAGALFGLAQVSQALAVVAAGLMVALHSSLCHEVLHGHPFARR
ALNEALVFLPLNLCVPYGRFRDTHLAHHQDENLTDPYDDPESNFMDPEIWARLPKWRQSLLRVNNTLLGRILLGPMIGQI
CFMQTDWRLARNGVCGIGRDWLLHGIGILLVLGIVSLSEMSVLAYLGAAYIGLALLKIRTYLEHRAHEDMHGRTAIVEGR
GVLGWILSFLFLNNNLHIVHHLYPGVPWHRLPRLYRQHRARFQDRNDGYVLPSYASVFRQFAFRAKDPVPHPLWKSSE

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36008; Mature: 36008

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVPPAIDVAEAEARAVLPKHPEWGTFLLIVACYLLWAGALFGLAQVSQALAVVAAGLM
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALHSSLCHEVLHGHPFARRALNEALVFLPLNLCVPYGRFRDTHLAHHQDENLTDPYDDP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCC
ESNFMDPEIWARLPKWRQSLLRVNNTLLGRILLGPMIGQICFMQTDWRLARNGVCGIGRD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHH
WLLHGIGILLVLGIVSLSEMSVLAYLGAAYIGLALLKIRTYLEHRAHEDMHGRTAIVEGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
GVLGWILSFLFLNNNLHIVHHLYPGVPWHRLPRLYRQHRARFQDRNDGYVLPSYASVFRQ
CHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHH
FAFRAKDPVPHPLWKSSE
HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MLEVPPAIDVAEAEARAVLPKHPEWGTFLLIVACYLLWAGALFGLAQVSQALAVVAAGLM
CCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VALHSSLCHEVLHGHPFARRALNEALVFLPLNLCVPYGRFRDTHLAHHQDENLTDPYDDP
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCC
ESNFMDPEIWARLPKWRQSLLRVNNTLLGRILLGPMIGQICFMQTDWRLARNGVCGIGRD
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHH
WLLHGIGILLVLGIVSLSEMSVLAYLGAAYIGLALLKIRTYLEHRAHEDMHGRTAIVEGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
GVLGWILSFLFLNNNLHIVHHLYPGVPWHRLPRLYRQHRARFQDRNDGYVLPSYASVFRQ
CHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHH
FAFRAKDPVPHPLWKSSE
HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA