Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081923

Identifier: 99081923

GI number: 99081923

Start: 2187810

End: 2188334

Strand: Reverse

Name: 99081923

Synonym: TM1040_2083

Alternate gene names: NA

Gene position: 2188334-2187810 (Counterclockwise)

Preceding gene: 99081924

Following gene: 99081921

Centisome position: 68.37

GC content: 54.67

Gene sequence:

>525_bases
GTGGCGAAACGAGAACCACTGACATTCTGGCAGTGGCATTTTTCGAAGACGAAACGGTTCACGATCCTTCTTTTTGGTGC
CAATGCGGCTGGCCCTTTTTGCTTGTGGCTGCTGCTGAGCGGTGCTGCCGCGACCTCTGGGGATGCCTCTGTGGCGCGTT
TACAGATGTCGCTTGTTTTATGGGTTGTCCTCTTGGCGGTGCTTTATTGGCTATTTCGCAAGGAAAGGCAGATCACGCCC
GCCAAAATCTCCCAAGGCGATAAGATCCGGTTCAGGTCTATCCCGAGCGATTTGGACGCAGACCATATCCTGCACCCCAT
CGAGCCTGCCACAAATGGCATGCCTCTGACGCAGCAGAAGATTTTCTCCTACTTGGTGACATGCGGCGATCATTTTACGG
TCTATGACAGTGCCGCAGCGGGGGGCAAGGAATTGCACCTGAAGCTGTGTGTTGAGGATCGGATGCAGACCTACGTGGTC
CCGGTTCCGGTCGACGACAGTTGGTATGTCTCGCGCTATGCTTGA

Upstream 100 bases:

>100_bases
CACTTGGTCCGACAGCCGCGTCGCCCGCGTCCGCGCTGCCTGGATGGCGATCGGCGATCTGCCGTTTGAGGATGATTGGG
ACGTGGAGTAGGGGGATCTC

Downstream 100 bases:

>100_bases
ACCTAACCCTGCAGGCACGATAATCACCACGTCCAGAAGGCTGTTCTCTGTTGGCGGCAGAAAATCTCGTATTTCCTTAT
TAGCACGCAGCGACCCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAKREPLTFWQWHFSKTKRFTILLFGANAAGPFCLWLLLSGAAATSGDASVARLQMSLVLWVVLLAVLYWLFRKERQITP
AKISQGDKIRFRSIPSDLDADHILHPIEPATNGMPLTQQKIFSYLVTCGDHFTVYDSAAAGGKELHLKLCVEDRMQTYVV
PVPVDDSWYVSRYA

Sequences:

>Translated_174_residues
MAKREPLTFWQWHFSKTKRFTILLFGANAAGPFCLWLLLSGAAATSGDASVARLQMSLVLWVVLLAVLYWLFRKERQITP
AKISQGDKIRFRSIPSDLDADHILHPIEPATNGMPLTQQKIFSYLVTCGDHFTVYDSAAAGGKELHLKLCVEDRMQTYVV
PVPVDDSWYVSRYA
>Mature_173_residues
AKREPLTFWQWHFSKTKRFTILLFGANAAGPFCLWLLLSGAAATSGDASVARLQMSLVLWVVLLAVLYWLFRKERQITPA
KISQGDKIRFRSIPSDLDADHILHPIEPATNGMPLTQQKIFSYLVTCGDHFTVYDSAAAGGKELHLKLCVEDRMQTYVVP
VPVDDSWYVSRYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19662; Mature: 19531

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKREPLTFWQWHFSKTKRFTILLFGANAAGPFCLWLLLSGAAATSGDASVARLQMSLVL
CCCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
WVVLLAVLYWLFRKERQITPAKISQGDKIRFRSIPSDLDADHILHPIEPATNGMPLTQQK
HHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
IFSYLVTCGDHFTVYDSAAAGGKELHLKLCVEDRMQTYVVPVPVDDSWYVSRYA
HHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEECC
>Mature Secondary Structure 
AKREPLTFWQWHFSKTKRFTILLFGANAAGPFCLWLLLSGAAATSGDASVARLQMSLVL
CCCCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
WVVLLAVLYWLFRKERQITPAKISQGDKIRFRSIPSDLDADHILHPIEPATNGMPLTQQK
HHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
IFSYLVTCGDHFTVYDSAAAGGKELHLKLCVEDRMQTYVVPVPVDDSWYVSRYA
HHHHHHHCCCCEEEEECCCCCCCEEEEEEEECCCCCEEEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA