| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99081888
Identifier: 99081888
GI number: 99081888
Start: 2152684
End: 2152923
Strand: Direct
Name: 99081888
Synonym: TM1040_2048
Alternate gene names: NA
Gene position: 2152684-2152923 (Clockwise)
Preceding gene: 99081882
Following gene: 99081889
Centisome position: 67.25
GC content: 56.67
Gene sequence:
>240_bases ATGGCGGGCCTTATTTCAGAAACCGCGGAATTTGCAAGAGCCCTCTCTCTGGGCGCTTTGAGCACACGAAATGACGCCCC CGCCAACGCGCGCAAAAAGTGGAGCGCTGGCACAGTTTCATGCGTGATCATGAGGGAGGTAGAATTGGGCGATTGGGGCA GGATAATGCGCGCGTCTTCCTATGGCGGCACGCAGGCGCACCCTCTCCCGTTCCCGATATATACCGAGGTAATTCAATGA
Upstream 100 bases:
>100_bases TGATATGCGCCAGCGACACGGAATCGAGTCCGCCAGAGCAGATGACAAGTGTTTTCATATCTGGGGCCCTTGTTTTGATG TCCGGGTAGGCTGCGACCGG
Downstream 100 bases:
>100_bases ATTAGTGATATACAAAGGGAGGAGATGGTGGGCGACCCTGGAATCGAACCAGGCGTGCGTCTCCGCGAGGGAGTTACAGT CCCCTGCCACACCTTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MAGLISETAEFARALSLGALSTRNDAPANARKKWSAGTVSCVIMREVELGDWGRIMRASSYGGTQAHPLPFPIYTEVIQ
Sequences:
>Translated_79_residues MAGLISETAEFARALSLGALSTRNDAPANARKKWSAGTVSCVIMREVELGDWGRIMRASSYGGTQAHPLPFPIYTEVIQ >Mature_78_residues AGLISETAEFARALSLGALSTRNDAPANARKKWSAGTVSCVIMREVELGDWGRIMRASSYGGTQAHPLPFPIYTEVIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8525; Mature: 8394
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLISETAEFARALSLGALSTRNDAPANARKKWSAGTVSCVIMREVELGDWGRIMRASS CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECC YGGTQAHPLPFPIYTEVIQ CCCCCCCCCCCHHHHHHCC >Mature Secondary Structure AGLISETAEFARALSLGALSTRNDAPANARKKWSAGTVSCVIMREVELGDWGRIMRASS CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEECC YGGTQAHPLPFPIYTEVIQ CCCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA