The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081876

Identifier: 99081876

GI number: 99081876

Start: 2144634

End: 2145170

Strand: Direct

Name: 99081876

Synonym: TM1040_2036

Alternate gene names: NA

Gene position: 2144634-2145170 (Clockwise)

Preceding gene: 99081874

Following gene: 99081877

Centisome position: 67.0

GC content: 60.71

Gene sequence:

>537_bases
ATGCTGATCCCTCGCCAGAAAACCCCGGACCTTACCCTGCCTCTCTTGGGTGGCGGCCAGTTTGATCTGGCCTCCGAGGC
CTCTGAACGCGGCACCGTCATCTGCTTTTACCGTGGCCTGCACTGCCCGATTTGTGCCAACTACCTCAAGGAGTTCGAAA
AGCGCGTGGCCGACTTTGCCGAGCGCGGCGTGAAGACCATCGCCATCAGCTCTGACGGCGAGGAGCGCACCCGCCAGATG
GCAGAGAAGATCGAAGCCGAAAACCTGCGCTTTGCCTATGATCTGCCGCTCTCCGTGGCCAAGGACTGGGGGCTCTATAT
CTCCACCTCGCGGGGCAAGACATCGATTGGCATTGAAGAGCCTGCGCTCTTTGCCGAGCCGGGCCTCTTTATGGTGACAC
CCGAGCAGACGCTGTACTACGGCTCTGTGCAGACGATGCCCTTTGTGCGCCCGCATTTCTCGGAACTGGTGGCGGCGCTA
GATTTTGCCATTGCCAATTCCTATCCGGCGCGCGGCGAATACACCGGCGCGGTCTGA

Upstream 100 bases:

>100_bases
GCCCAGAGTCGTGCGATACCCTCTGCAGAGCTGTTCCGGCGCGCCGGGACAGTGTCACATCAGACACCCCTCAAGACTGA
CCCACATACGGAGACACATC

Downstream 100 bases:

>100_bases
GCGCACCTCTGCATCCCAGCTGCATCACCGGTCCCCGAAACGGCCAAGAGCAATGGACATCGCCTGACCAAGAAGGCATA
TGGGCCTGACCAGTTTTACG

Product: redoxin

Products: NA

Alternate protein names: Thioredoxin Peroxidase; Redoxin Domain-Containing Protein; AhpC/TSA Family Protein; Antioxidant AhpC/TSA Family

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLIPRQKTPDLTLPLLGGGQFDLASEASERGTVICFYRGLHCPICANYLKEFEKRVADFAERGVKTIAISSDGEERTRQM
AEKIEAENLRFAYDLPLSVAKDWGLYISTSRGKTSIGIEEPALFAEPGLFMVTPEQTLYYGSVQTMPFVRPHFSELVAAL
DFAIANSYPARGEYTGAV

Sequences:

>Translated_178_residues
MLIPRQKTPDLTLPLLGGGQFDLASEASERGTVICFYRGLHCPICANYLKEFEKRVADFAERGVKTIAISSDGEERTRQM
AEKIEAENLRFAYDLPLSVAKDWGLYISTSRGKTSIGIEEPALFAEPGLFMVTPEQTLYYGSVQTMPFVRPHFSELVAAL
DFAIANSYPARGEYTGAV
>Mature_178_residues
MLIPRQKTPDLTLPLLGGGQFDLASEASERGTVICFYRGLHCPICANYLKEFEKRVADFAERGVKTIAISSDGEERTRQM
AEKIEAENLRFAYDLPLSVAKDWGLYISTSRGKTSIGIEEPALFAEPGLFMVTPEQTLYYGSVQTMPFVRPHFSELVAAL
DFAIANSYPARGEYTGAV

Specific function: Unknown

COG id: COG0450

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19724; Mature: 19724

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIPRQKTPDLTLPLLGGGQFDLASEASERGTVICFYRGLHCPICANYLKEFEKRVADFA
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
ERGVKTIAISSDGEERTRQMAEKIEAENLRFAYDLPLSVAKDWGLYISTSRGKTSIGIEE
HCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCHHHHCCCCEEEECCCCCEECCCCC
PALFAEPGLFMVTPEQTLYYGSVQTMPFVRPHFSELVAALDFAIANSYPARGEYTGAV
CCEEECCCEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLIPRQKTPDLTLPLLGGGQFDLASEASERGTVICFYRGLHCPICANYLKEFEKRVADFA
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
ERGVKTIAISSDGEERTRQMAEKIEAENLRFAYDLPLSVAKDWGLYISTSRGKTSIGIEE
HCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEECCHHHHCCCCEEEECCCCCEECCCCC
PALFAEPGLFMVTPEQTLYYGSVQTMPFVRPHFSELVAALDFAIANSYPARGEYTGAV
CCEEECCCEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA