Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081870

Identifier: 99081870

GI number: 99081870

Start: 2138667

End: 2139152

Strand: Reverse

Name: 99081870

Synonym: TM1040_2030

Alternate gene names: NA

Gene position: 2139152-2138667 (Counterclockwise)

Preceding gene: 99081872

Following gene: 99081867

Centisome position: 66.83

GC content: 61.73

Gene sequence:

>486_bases
ATGAGACAGCCGCACCGCCCCGTGATCCGTTTTGTTCGCCTGTCCGAAATCGACCCGCAAGAGATCACGGCCCATATGTC
CGATCCTCTGATGGCCGAGCACATGCCGCTCTTGGAAGGGGTGGAGTGGAATGCCGCGCAGACCGAGCAGTTTGTCGCAG
CCAAAGAAGCCTGCTGGGCGCGCGACGGCCTGGGGCATTGGGGCATTCTCTCGGATGATGCCTATATCGGGTGGGGCGGT
TTTCAGAAAGAGGACGAGGAGTGGGATTTCGGGTTGGTGCTGCGGCACAGCGCCTTTGGTCGGGGCATACAAGTCGCCAA
GGCCGCCCTTGCGGTGGCGGCGCAGGACACGCGCATTCCCTTTGTGACTTTTCTTTTGCCGCCATCGCGTCGTCATCTCG
GAGCGCTGCGGCGTCTGGGGGCAGAACGTCTGCCGGATGTGGAGCACGCAGGCAGGCCGTTTATGAAGTTCAGGCTGGTG
TTGTGA

Upstream 100 bases:

>100_bases
AAAACGGCCCGATTGCGCAAATGTGATTGGCAGCGTCCGTGCGGGGGCCGCTAAGGCGGGCAAAGCACTCGCGCTATGCA
CAGTCAGGAAGATCTTCGCC

Downstream 100 bases:

>100_bases
CTATTTGAAGGGAATTTTTGAGGCGCACATATCGGGCCGATCGTGGGTGTAAGATTGGAAGACGTTTCTGGTGAAACGCT
CGACTTTTGCGAAGTCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWARDGLGHWGILSDDAYIGWGG
FQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIPFVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLV
L

Sequences:

>Translated_161_residues
MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWARDGLGHWGILSDDAYIGWGG
FQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIPFVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLV
L
>Mature_161_residues
MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWARDGLGHWGILSDDAYIGWGG
FQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIPFVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLV
L

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18218; Mature: 18218

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWA
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHH
RDGLGHWGILSDDAYIGWGGFQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIP
HCCCCCCCEECCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
FVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLVL
EEEEEECCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECC
>Mature Secondary Structure
MRQPHRPVIRFVRLSEIDPQEITAHMSDPLMAEHMPLLEGVEWNAAQTEQFVAAKEACWA
CCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHH
RDGLGHWGILSDDAYIGWGGFQKEDEEWDFGLVLRHSAFGRGIQVAKAALAVAAQDTRIP
HCCCCCCCEECCCCEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC
FVTFLLPPSRRHLGALRRLGAERLPDVEHAGRPFMKFRLVL
EEEEEECCCHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA