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The map label for this gene is fdx [C]

Identifier: 99081789

GI number: 99081789

Start: 2052543

End: 2052935

Strand: Reverse

Name: fdx [C]

Synonym: TM1040_1949

Alternate gene names: 99081789

Gene position: 2052935-2052543 (Counterclockwise)

Preceding gene: 99081793

Following gene: 99081788

Centisome position: 64.14

GC content: 56.74

Gene sequence:

>393_bases
ATGGGGCTGGCACGGTGCAGGCGTCAACGCTACACACGTTATCGAGTACCGAAAAAGGGAAGACGGATCATGGCAAAAAT
CACCTACATCGAGCACAACGGGACTGAACATGTGGTCGACGTCGCCAACGGGCTGACCGTGATGGAAGGTGCGCGTGACA
ATAATATTCCGGGGATCGAAGCCGATTGCGGCGGCGCTTGCGCCTGTTCTACCTGTCACGTCTATATCGCTCCGGACTGG
GTGGAAAAACTGCCCGCAAAGGACGACATGGAAGAGGACATGCTGGACTTTGCCTTTGAGCCCGATGCTGCGCGGTCGCG
CCTGACCTGCCAGATCAAGGTGACCGATGCGCTGGATGGTCTGGTGGTTCACATGCCTGAAAAGCAGATCTGA

Upstream 100 bases:

>100_bases
GCAGGCAAAGCGTGTCAACGCGGCTTTGACCATAGCTCTGGCTCGAAGCTGATCCAGAAAAAGCAGATCGAAATCGCCAG
CGACGCGCGGGATCTGTGAA

Downstream 100 bases:

>100_bases
TGGGATCTGGGGGCAAAGCGCGGCGGCTTCGGGCGCGCGTGTTGCCCCCGATTCTACGCCGCGCGGCGCAGATTCTGTCT
GTGTCGCTGGCGGTGCTGGC

Product: ferredoxin

Products: NA

Alternate protein names: Ferredoxin VI; FdVI [H]

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MGLARCRRQRYTRYRVPKKGRRIMAKITYIEHNGTEHVVDVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYIAPDW
VEKLPAKDDMEEDMLDFAFEPDAARSRLTCQIKVTDALDGLVVHMPEKQI

Sequences:

>Translated_130_residues
MGLARCRRQRYTRYRVPKKGRRIMAKITYIEHNGTEHVVDVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYIAPDW
VEKLPAKDDMEEDMLDFAFEPDAARSRLTCQIKVTDALDGLVVHMPEKQI
>Mature_129_residues
GLARCRRQRYTRYRVPKKGRRIMAKITYIEHNGTEHVVDVANGLTVMEGARDNNIPGIEADCGGACACSTCHVYIAPDWV
EKLPAKDDMEEDMLDFAFEPDAARSRLTCQIKVTDALDGLVVHMPEKQI

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17544202, Length=113, Percent_Identity=40.7079646017699, Blast_Score=71, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6325004, Length=118, Percent_Identity=39.8305084745763, Blast_Score=92, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24661503, Length=122, Percent_Identity=32.7868852459016, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 14581; Mature: 14450

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
9.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLARCRRQRYTRYRVPKKGRRIMAKITYIEHNGTEHVVDVANGLTVMEGARDNNIPGIE
CCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEECCCCEEEEECCCCCCCCCCC
ADCGGACACSTCHVYIAPDWVEKLPAKDDMEEDMLDFAFEPDAARSRLTCQIKVTDALDG
CCCCCCEEECEEEEEECCHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCC
LVVHMPEKQI
EEEECCCCCC
>Mature Secondary Structure 
GLARCRRQRYTRYRVPKKGRRIMAKITYIEHNGTEHVVDVANGLTVMEGARDNNIPGIE
CHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCEEECCCCEEEEECCCCCCCCCCC
ADCGGACACSTCHVYIAPDWVEKLPAKDDMEEDMLDFAFEPDAARSRLTCQIKVTDALDG
CCCCCCEEECEEEEEECCHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCCCCC
LVVHMPEKQI
EEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026503; 11173487 [H]