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The map label for this gene is 99081788

Identifier: 99081788

GI number: 99081788

Start: 2051746

End: 2052543

Strand: Reverse

Name: 99081788

Synonym: TM1040_1948

Alternate gene names: NA

Gene position: 2052543-2051746 (Counterclockwise)

Preceding gene: 99081789

Following gene: 99081786

Centisome position: 64.12

GC content: 64.91

Gene sequence:

>798_bases
ATGGGATCTGGGGGCAAAGCGCGGCGGCTTCGGGCGCGCGTGTTGCCCCCGATTCTACGCCGCGCGGCGCAGATTCTGTC
TGTGTCGCTGGCGGTGCTGGCGCAGGCGGCACCCGGCGCCGCGCGTGAACACTGGCGCGTTCTGGGCGCCGAGTTTTCCG
AGCCGACCACCCGCTATGGGCATGCTGTTCTTGGCGATGACGTGGAATACGGCAGCCTGCTGATCCGCCGCGTCGAGACC
GGCAGCACCGCCACTCAGACGCTGGAGATCAAGCTGCCGCTGACCCATGTCTTTGAGGATCTGGAGCCGCGCCTCTGGGA
TGTCACCGGAGATGGTCTGCCCGAAGTTGTCGTCATCGAGACAGATATGAGTCGGGGTGCGCAATTGGCAGTCTACGATG
CCGAGGGCAATAAGCGCGCCGCCACCCCTCATATTGGCCAGCGCAATCGCTGGCTGGCCCCGATCGGGGCGGCGGATCTG
GATGGGGACGGGCACATCGAGATTGCCTATATCGACCGCCCACATCTGGCCAAGACCTTGCGGATCTGGCGCTATGAGGG
CCACAATCTGGTGGAGGTCGCCTCTGCCACGGGGTTGACCAATCACAAGATCGGGCAGGATTTCATCACCTCCGGCCTGC
GCGACTGTGGTGCGGGGCCGGAGCTCATCACCGTCAGTGCGGGTTGGTCGCGCATCATCACGTCGCGCCTTGAAGGTGGG
GCCGTGATCTCGCGCGATCTGGGGCCGTTTGATGCGGAAAAAGGGCTTCGCGCCACGCTCGCCTGCGCGGCCAACTAA

Upstream 100 bases:

>100_bases
CCTTTGAGCCCGATGCTGCGCGGTCGCGCCTGACCTGCCAGATCAAGGTGACCGATGCGCTGGATGGTCTGGTGGTTCAC
ATGCCTGAAAAGCAGATCTG

Downstream 100 bases:

>100_bases
TGGACGCTGCGGCGCATCGTGATTGAGGTCGGTCATAGCCGCTGTGCGTGGTGGTGCCGCACCGCTCAAAACCAAGACGT
GCAAAGGCTTCGTGGTTCTC

Product: integrins alpha chain

Products: NA

Alternate protein names: FG-GAP Repeat-Containing Protein; FG-GAP Repeat Domain Protein; Integrin Alpha Chain

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGSGGKARRLRARVLPPILRRAAQILSVSLAVLAQAAPGAAREHWRVLGAEFSEPTTRYGHAVLGDDVEYGSLLIRRVET
GSTATQTLEIKLPLTHVFEDLEPRLWDVTGDGLPEVVVIETDMSRGAQLAVYDAEGNKRAATPHIGQRNRWLAPIGAADL
DGDGHIEIAYIDRPHLAKTLRIWRYEGHNLVEVASATGLTNHKIGQDFITSGLRDCGAGPELITVSAGWSRIITSRLEGG
AVISRDLGPFDAEKGLRATLACAAN

Sequences:

>Translated_265_residues
MGSGGKARRLRARVLPPILRRAAQILSVSLAVLAQAAPGAAREHWRVLGAEFSEPTTRYGHAVLGDDVEYGSLLIRRVET
GSTATQTLEIKLPLTHVFEDLEPRLWDVTGDGLPEVVVIETDMSRGAQLAVYDAEGNKRAATPHIGQRNRWLAPIGAADL
DGDGHIEIAYIDRPHLAKTLRIWRYEGHNLVEVASATGLTNHKIGQDFITSGLRDCGAGPELITVSAGWSRIITSRLEGG
AVISRDLGPFDAEKGLRATLACAAN
>Mature_264_residues
GSGGKARRLRARVLPPILRRAAQILSVSLAVLAQAAPGAAREHWRVLGAEFSEPTTRYGHAVLGDDVEYGSLLIRRVETG
STATQTLEIKLPLTHVFEDLEPRLWDVTGDGLPEVVVIETDMSRGAQLAVYDAEGNKRAATPHIGQRNRWLAPIGAADLD
GDGHIEIAYIDRPHLAKTLRIWRYEGHNLVEVASATGLTNHKIGQDFITSGLRDCGAGPELITVSAGWSRIITSRLEGGA
VISRDLGPFDAEKGLRATLACAAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28548; Mature: 28417

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSGGKARRLRARVLPPILRRAAQILSVSLAVLAQAAPGAAREHWRVLGAEFSEPTTRYG
CCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHC
HAVLGDDVEYGSLLIRRVETGSTATQTLEIKLPLTHVFEDLEPRLWDVTGDGLPEVVVIE
CEEECCCCCHHHHEEEEECCCCCCEEEEEEEECHHHHHHHCCCEEEEECCCCCCEEEEEE
TDMSRGAQLAVYDAEGNKRAATPHIGQRNRWLAPIGAADLDGDGHIEIAYIDRPHLAKTL
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCHHHHHE
RIWRYEGHNLVEVASATGLTNHKIGQDFITSGLRDCGAGPELITVSAGWSRIITSRLEGG
EEEEECCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCC
AVISRDLGPFDAEKGLRATLACAAN
EEEECCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure 
GSGGKARRLRARVLPPILRRAAQILSVSLAVLAQAAPGAAREHWRVLGAEFSEPTTRYG
CCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHC
HAVLGDDVEYGSLLIRRVETGSTATQTLEIKLPLTHVFEDLEPRLWDVTGDGLPEVVVIE
CEEECCCCCHHHHEEEEECCCCCCEEEEEEEECHHHHHHHCCCEEEEECCCCCCEEEEEE
TDMSRGAQLAVYDAEGNKRAATPHIGQRNRWLAPIGAADLDGDGHIEIAYIDRPHLAKTL
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCHHHHHE
RIWRYEGHNLVEVASATGLTNHKIGQDFITSGLRDCGAGPELITVSAGWSRIITSRLEGG
EEEEECCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCC
AVISRDLGPFDAEKGLRATLACAAN
EEEECCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA