Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

Click here to switch to the map view.

The map label for this gene is ispZ [H]

Identifier: 99081781

GI number: 99081781

Start: 2044201

End: 2044836

Strand: Reverse

Name: ispZ [H]

Synonym: TM1040_1940

Alternate gene names: 99081781

Gene position: 2044836-2044201 (Counterclockwise)

Preceding gene: 99081782

Following gene: 99081779

Centisome position: 63.88

GC content: 57.23

Gene sequence:

>636_bases
ATGAGCGAACAGACAAGTGATCCAAGCCCGGCGGCGCGCAAGATAAGCCCCCTGGTCAAGAACTTATTGGAGTTCGGCCC
GGTTGTTCTGTTCTTCGTGGCGTATCTGAGGCTCAAGGATCAGGTGTTTGAGATCGGCGGCACCTCCTATGAGGGGTTCA
TCGTTGTGACCGCAGGCTTTGTACCGCTGATGATCCTCTCGACGCTGATCCTGTGGCGGCTTACGGGCAAACTCTCGCGC
ATGCAGGTGATGACGCTGGTGCTGATTGTGGTCTTTGGCGGGCTCTCGGTCTGGTTCAACGACGAGCGCTTTTTCAAGAT
GAAGCCGACGATGATCTACCTGCTCTTTGGCGGCATGCTGGGCGTGGGGCTTTTGCGCGGTCAGAGTTACCTGCGTGTGG
TGATGGAAGAGATGATGCCGCTTCAGGACGAGGGGTGGATGATCCTCACACGTCGCCTCTGTGCGTTCTTCTTTGGGCTG
GCGGTCGCCAATGAGGTGATCTGGCGCATGATGAGCACGGAAACCTGGGTCTATTTCAAGACCTTCGGTCTGACGGCTGC
GATGTTCCTGTTCTTCATGACTCAGGCTCGGCTGTTCCAGATCTACGGGCTCGAGGAACAGGGCGAGGCCGAGTAG

Upstream 100 bases:

>100_bases
TTGCGTTGATGGCGTTGATCGCTGCAGGTGCGGTGATTGTTGAAATGGGGGGCTGAGGGTGCCATCTGAGAGGGATGATT
TGGGACAGGAGAGGCCAGCA

Downstream 100 bases:

>100_bases
GCCACATCATCTGAGCGCGCGTCGCCCGAATCTATGCCTGAGAATTGACCGCCTCCGAGGGGGAGCGATGCGCATCGTGA
CCGGGCGTCGCTGGTCGCCC

Product: intracellular septation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGFVPLMILSTLILWRLTGKLSR
MQVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGMLGVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGL
AVANEVIWRMMSTETWVYFKTFGLTAAMFLFFMTQARLFQIYGLEEQGEAE

Sequences:

>Translated_211_residues
MSEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGFVPLMILSTLILWRLTGKLSR
MQVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGMLGVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGL
AVANEVIWRMMSTETWVYFKTFGLTAAMFLFFMTQARLFQIYGLEEQGEAE
>Mature_210_residues
SEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGFVPLMILSTLILWRLTGKLSRM
QVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGMLGVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGLA
VANEVIWRMMSTETWVYFKTFGLTAAMFLFFMTQARLFQIYGLEEQGEAE

Specific function: Involved in cell division; probably involved in intracellular septation [H]

COG id: COG2917

COG function: function code D; Intracellular septation protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ispZ family [H]

Homologues:

Organism=Escherichia coli, GI1787507, Length=173, Percent_Identity=32.9479768786127, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006008 [H]

Pfam domain/function: PF04279 IspA [H]

EC number: NA

Molecular weight: Translated: 24164; Mature: 24033

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGF
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHH
VPLMILSTLILWRLTGKLSRMQVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECHHHHHHHHHHHH
GVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGLAVANEVIWRMMSTETWVYFK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH
TFGLTAAMFLFFMTQARLFQIYGLEEQGEAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SEQTSDPSPAARKISPLVKNLLEFGPVVLFFVAYLRLKDQVFEIGGTSYEGFIVVTAGF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHH
VPLMILSTLILWRLTGKLSRMQVMTLVLIVVFGGLSVWFNDERFFKMKPTMIYLLFGGML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECHHHHHHHHHHHH
GVGLLRGQSYLRVVMEEMMPLQDEGWMILTRRLCAFFFGLAVANEVIWRMMSTETWVYFK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHH
TFGLTAAMFLFFMTQARLFQIYGLEEQGEAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]