| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is folE2
Identifier: 99081778
GI number: 99081778
Start: 2040105
End: 2041208
Strand: Reverse
Name: folE2
Synonym: TM1040_1937
Alternate gene names: 99081778
Gene position: 2041208-2040105 (Counterclockwise)
Preceding gene: 99081779
Following gene: 99081777
Centisome position: 63.77
GC content: 59.33
Gene sequence:
>1104_bases ATGAATATTCATTCTCGTGATGTAAACGAAACGCCAGATCGCTCGGACGCGGAACAAGCGCTTGCGGTGCTGCGGCGCTG GGCGGGCGAAGCAAGCGAGACCGAAGTGGCGCAGCTCGACCCTGCGATTGCGCGCCTGCTGCCCGGGCAGGAATTGCAGA ATTACCCCGACCTCAAGCGCCAGTACCCGGACGACTTTGATGCAAACGAGTCCTACCGCGCCACGCTCCCGGATCTTCAG AACGGCCCTTCCAGCCTGATCCGCGGCGCCAAGGAGCAGATCCAGCATGTCGGTATCTCCAATTTCCGCCTGCCGATCCG GTTTCATACGCGGGACAACGGTGATCTGACGCTCGAGACCAGCGTAACCGGCACCGTCAGCTTGGATGCGGAGAAAAAAG GCATCAACATGTCGCGCATCATGCGCAGCTTTTACAAACATGCTGAGAAGGTCTTTTCTTTCGACGTGATGGAAGCAGCT CTTGAGGATTATCTGAGCGATCTTGAGAGTGGCGACGCGCGGCTGCAGATGCGGTTTTCCTTCCCTGTGAAGGTGCAGAG CCTGCGCTCGGGTCTTTCGGGCTATCAGTATTACGACGTGGCGCTGGAACTGGTGCAGATGGCTGGGCAACGCCATCGCA TCGTGCATCTGGACTATGTCTATTCTTCGACCTGCCCGTGCTCGCTTGAGCTTTCGGAACATGCCCGTCAGGCGCGTGGA CAGCTGGCGACCCCGCACTCGCAGCGCTCTGTTGCGCGGATTTCCGTGCAGATGGAACAGGATGGCGGCTGTTTGTGGTT CGAGGATCTGATCGACCATTGCCGTCGCGCGGTGCCGACCGAGACGCAGGTGATGGTGAAGCGCGAAGACGAACAGGCAT TTGCGGAGTTGAACGCGGCCAATCCGATCTTTGTGGAAGATGCGGCGCGCCTCTTTTGTGAAGCGCTTCAGAGCGATGCG CGGGTGGGGGATTTTCGGGTTGTGGCGAGCCATCAGGAAAGCCTGCACAGCCATGACGCGGTCTCTGTGCTGACGCAGGG CACGATGTTTGCGGCGCCGAGCCTCGACCCGCAGCTATTCTCGACTTTGATCCATCGCGGTTAG
Upstream 100 bases:
>100_bases ACCTTTTGGGGCGTTTTTTGGTGATCTACTTTGTGTTTATTGACGTACTACCCTAGATGATTGTGAACAGGCATTTGCTG CTGGGACAGGAGTACGGGTT
Downstream 100 bases:
>100_bases GGTCGGATGCGAGGGGCGCTGCCCCTCGCGCTCCCCGAGGTATTTTCAAAAAGATGAAAGCATAGGCCCTCCCGGGAGGA TGGGCTTGTTTTTGCCGCGG
Product: putative GTP cyclohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MNIHSRDVNETPDRSDAEQALAVLRRWAGEASETEVAQLDPAIARLLPGQELQNYPDLKRQYPDDFDANESYRATLPDLQ NGPSSLIRGAKEQIQHVGISNFRLPIRFHTRDNGDLTLETSVTGTVSLDAEKKGINMSRIMRSFYKHAEKVFSFDVMEAA LEDYLSDLESGDARLQMRFSFPVKVQSLRSGLSGYQYYDVALELVQMAGQRHRIVHLDYVYSSTCPCSLELSEHARQARG QLATPHSQRSVARISVQMEQDGGCLWFEDLIDHCRRAVPTETQVMVKREDEQAFAELNAANPIFVEDAARLFCEALQSDA RVGDFRVVASHQESLHSHDAVSVLTQGTMFAAPSLDPQLFSTLIHRG
Sequences:
>Translated_367_residues MNIHSRDVNETPDRSDAEQALAVLRRWAGEASETEVAQLDPAIARLLPGQELQNYPDLKRQYPDDFDANESYRATLPDLQ NGPSSLIRGAKEQIQHVGISNFRLPIRFHTRDNGDLTLETSVTGTVSLDAEKKGINMSRIMRSFYKHAEKVFSFDVMEAA LEDYLSDLESGDARLQMRFSFPVKVQSLRSGLSGYQYYDVALELVQMAGQRHRIVHLDYVYSSTCPCSLELSEHARQARG QLATPHSQRSVARISVQMEQDGGCLWFEDLIDHCRRAVPTETQVMVKREDEQAFAELNAANPIFVEDAARLFCEALQSDA RVGDFRVVASHQESLHSHDAVSVLTQGTMFAAPSLDPQLFSTLIHRG >Mature_367_residues MNIHSRDVNETPDRSDAEQALAVLRRWAGEASETEVAQLDPAIARLLPGQELQNYPDLKRQYPDDFDANESYRATLPDLQ NGPSSLIRGAKEQIQHVGISNFRLPIRFHTRDNGDLTLETSVTGTVSLDAEKKGINMSRIMRSFYKHAEKVFSFDVMEAA LEDYLSDLESGDARLQMRFSFPVKVQSLRSGLSGYQYYDVALELVQMAGQRHRIVHLDYVYSSTCPCSLELSEHARQARG QLATPHSQRSVARISVQMEQDGGCLWFEDLIDHCRRAVPTETQVMVKREDEQAFAELNAANPIFVEDAARLFCEALQSDA RVGDFRVVASHQESLHSHDAVSVLTQGTMFAAPSLDPQLFSTLIHRG
Specific function: Converts GTP to 7,8-dihydroneopterin triphosphate
COG id: COG1469
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase IV family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GCH4_SILST (Q1GF96)
Other databases:
- EMBL: CP000377 - RefSeq: YP_613932.1 - ProteinModelPortal: Q1GF96 - SMR: Q1GF96 - STRING: Q1GF96 - GeneID: 4076888 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_1937 - NMPDR: fig|292414.1.peg.324 - eggNOG: COG1469 - HOGENOM: HBG466315 - OMA: SLMDYEV - ProtClustDB: PRK13674 - BioCyc: SSP292414:TM1040_1937-MONOMER - HAMAP: MF_01527_B - InterPro: IPR022838 - InterPro: IPR003801 - InterPro: IPR002042 - Gene3D: G3DSA:3.10.270.10
Pfam domain/function: PF02649 DUF198
EC number: =3.5.4.16
Molecular weight: Translated: 41243; Mature: 41243
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIHSRDVNETPDRSDAEQALAVLRRWAGEASETEVAQLDPAIARLLPGQELQNYPDLKR CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHCCCHHHHCCCCHHH QYPDDFDANESYRATLPDLQNGPSSLIRGAKEQIQHVGISNFRLPIRFHTRDNGDLTLET CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEE SVTGTVSLDAEKKGINMSRIMRSFYKHAEKVFSFDVMEAALEDYLSDLESGDARLQMRFS ECEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE FPVKVQSLRSGLSGYQYYDVALELVQMAGQRHRIVHLDYVYSSTCPCSLELSEHARQARG CCEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCC QLATPHSQRSVARISVQMEQDGGCLWFEDLIDHCRRAVPTETQVMVKREDEQAFAELNAA CCCCCCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCC NPIFVEDAARLFCEALQSDARVGDFRVVASHQESLHSHDAVSVLTQGTMFAAPSLDPQLF CCEEHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEECCCCCHHHH STLIHRG HHHHHCC >Mature Secondary Structure MNIHSRDVNETPDRSDAEQALAVLRRWAGEASETEVAQLDPAIARLLPGQELQNYPDLKR CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHCCCHHHHCCCCHHH QYPDDFDANESYRATLPDLQNGPSSLIRGAKEQIQHVGISNFRLPIRFHTRDNGDLTLET CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEE SVTGTVSLDAEKKGINMSRIMRSFYKHAEKVFSFDVMEAALEDYLSDLESGDARLQMRFS ECEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE FPVKVQSLRSGLSGYQYYDVALELVQMAGQRHRIVHLDYVYSSTCPCSLELSEHARQARG CCEEHHHHHCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHCC QLATPHSQRSVARISVQMEQDGGCLWFEDLIDHCRRAVPTETQVMVKREDEQAFAELNAA CCCCCCCCCCEEEEEEEEECCCCEEEHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCC NPIFVEDAARLFCEALQSDARVGDFRVVASHQESLHSHDAVSVLTQGTMFAAPSLDPQLF CCEEHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCEEECCCCCHHHH STLIHRG HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA