| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yfcG [H]
Identifier: 99081772
GI number: 99081772
Start: 2030640
End: 2031323
Strand: Reverse
Name: yfcG [H]
Synonym: TM1040_1931
Alternate gene names: 99081772
Gene position: 2031323-2030640 (Counterclockwise)
Preceding gene: 99081773
Following gene: 99081767
Centisome position: 63.46
GC content: 57.75
Gene sequence:
>684_bases TTGACGCGGCCCCTCGGGTCGCGTCACTCTGCGCTGCAGAAACGACTCGCGGAGACCCTCATGATCGACCTATACACCTG GAACACCCCCAACGGGCGCAAGGTCTCCATCCTGCTCGAAGAGTTGAACGTACCTTATACCGCACATGCGATCGACATTG CGACGGGCGCGCAAATGGCGCCCGCGTTTCTTGCGATCAGCCCGAATAACAAGATCCCGGCCATCCGCGATCAAGAGACC GGTGTCACCTTGATGGAGTCAGGCGCGATCCTGATTTATCTTGCTGAAAAACATGGTCAATTCTTGCCGCCTGAACAGCG GATCGAGATCTATGAATGGCTGATGTGGCAGATGGCTGGTTTTGGACCGATGCTGGGGCAGGCGCACCATTTCCTAAAGT ACAACCGTGGCGCCTCCGACTATGCAGAGGAGCGCTATGGTGCCGAGGCGCGGCGTCTCTACGGCGTTCTGGATCGCCGT CTTGAGGGGCGTGACTATATCGTCAACGACTATTCGATTGCCGATATGGCCTGCTGGCCATGGGTGTCGCGCTATGAATG GCAGGACATCGATCTACGCGATTTCCCCAATGTGCGCAGATGGTACCAGGCCATTGCGGCCCGTCCGGCCGTGCAGCGCG GATATCATTTGCCCGATCATGTCAATGAGATCCCGCAGGGTTGA
Upstream 100 bases:
>100_bases CAGTCGCTTTCGGCTGTACGCGCCGAAGGACAGGGCAAGGCAAACGCCTGAGGCACGTTCTGCCTCTGGGTGCGCCAAAC AATTCGTGACGGTGACTTGA
Downstream 100 bases:
>100_bases GGCCCCGTTGGTCTGACGTTCTCTAGTTTGAGAGCTCTCCCATGACCTCCCGGGCCATGCGTTCGATGGCCGGGCGGGCC TCTTCTGCGCTCATTCCGAC
Product: glutathione S-transferase-like
Products: HX; R-S-glutathione
Alternate protein names: GST-like protein yfcG [H]
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTRPLGSRHSALQKRLAETLMIDLYTWNTPNGRKVSILLEELNVPYTAHAIDIATGAQMAPAFLAISPNNKIPAIRDQET GVTLMESGAILIYLAEKHGQFLPPEQRIEIYEWLMWQMAGFGPMLGQAHHFLKYNRGASDYAEERYGAEARRLYGVLDRR LEGRDYIVNDYSIADMACWPWVSRYEWQDIDLRDFPNVRRWYQAIAARPAVQRGYHLPDHVNEIPQG
Sequences:
>Translated_227_residues MTRPLGSRHSALQKRLAETLMIDLYTWNTPNGRKVSILLEELNVPYTAHAIDIATGAQMAPAFLAISPNNKIPAIRDQET GVTLMESGAILIYLAEKHGQFLPPEQRIEIYEWLMWQMAGFGPMLGQAHHFLKYNRGASDYAEERYGAEARRLYGVLDRR LEGRDYIVNDYSIADMACWPWVSRYEWQDIDLRDFPNVRRWYQAIAARPAVQRGYHLPDHVNEIPQG >Mature_226_residues TRPLGSRHSALQKRLAETLMIDLYTWNTPNGRKVSILLEELNVPYTAHAIDIATGAQMAPAFLAISPNNKIPAIRDQETG VTLMESGAILIYLAEKHGQFLPPEQRIEIYEWLMWQMAGFGPMLGQAHHFLKYNRGASDYAEERYGAEARRLYGVLDRRL EGRDYIVNDYSIADMACWPWVSRYEWQDIDLRDFPNVRRWYQAIAARPAVQRGYHLPDHVNEIPQG
Specific function: Has disulfide bond reductase activity (in vitro). Has low hydroperoxidase activity with cumene hydroperoxide. Has very low glutathione-S-transferase activity (in vitro) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1788640, Length=199, Percent_Identity=49.2462311557789, Blast_Score=184, Evalue=5e-48, Organism=Escherichia coli, GI87082195, Length=212, Percent_Identity=40.5660377358491, Blast_Score=144, Evalue=4e-36, Organism=Escherichia coli, GI87081789, Length=202, Percent_Identity=29.7029702970297, Blast_Score=73, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324100, Length=225, Percent_Identity=32, Blast_Score=102, Evalue=6e-23, Organism=Drosophila melanogaster, GI17933730, Length=190, Percent_Identity=29.4736842105263, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI28571670, Length=170, Percent_Identity=32.9411764705882, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI17864596, Length=189, Percent_Identity=29.1005291005291, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17864592, Length=177, Percent_Identity=28.8135593220339, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI17864598, Length=178, Percent_Identity=30.3370786516854, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI17864594, Length=190, Percent_Identity=30.5263157894737, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI45549270, Length=176, Percent_Identity=28.9772727272727, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI85725204, Length=190, Percent_Identity=28.4210526315789, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI17737923, Length=190, Percent_Identity=28.4210526315789, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI221378983, Length=179, Percent_Identity=27.3743016759777, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646259, Length=179, Percent_Identity=27.3743016759777, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646251, Length=192, Percent_Identity=27.6041666666667, Blast_Score=65, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: 2.5.1.18
Molecular weight: Translated: 26160; Mature: 26029
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPLGSRHSALQKRLAETLMIDLYTWNTPNGRKVSILLEELNVPYTAHAIDIATGAQMA CCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCC PAFLAISPNNKIPAIRDQETGVTLMESGAILIYLAEKHGQFLPPEQRIEIYEWLMWQMAG CEEEEECCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHC FGPMLGQAHHFLKYNRGASDYAEERYGAEARRLYGVLDRRLEGRDYIVNDYSIADMACWP CCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHCC WVSRYEWQDIDLRDFPNVRRWYQAIAARPAVQRGYHLPDHVNEIPQG CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCHHHHHCCCC >Mature Secondary Structure TRPLGSRHSALQKRLAETLMIDLYTWNTPNGRKVSILLEELNVPYTAHAIDIATGAQMA CCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCC PAFLAISPNNKIPAIRDQETGVTLMESGAILIYLAEKHGQFLPPEQRIEIYEWLMWQMAG CEEEEECCCCCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHC FGPMLGQAHHFLKYNRGASDYAEERYGAEARRLYGVLDRRLEGRDYIVNDYSIADMACWP CCHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHCC WVSRYEWQDIDLRDFPNVRRWYQAIAARPAVQRGYHLPDHVNEIPQG CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RX; glutathione
Specific reaction: RX + glutathione = HX + R-S-glutathione
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]