Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081764

Identifier: 99081764

GI number: 99081764

Start: 2024218

End: 2024511

Strand: Reverse

Name: 99081764

Synonym: TM1040_1923

Alternate gene names: NA

Gene position: 2024511-2024218 (Counterclockwise)

Preceding gene: 99081765

Following gene: 99081763

Centisome position: 63.25

GC content: 60.2

Gene sequence:

>294_bases
ATGTTTGTGATCTGTTTGAAGTTGACCGCAGACAGGGAGCGTATCTCTGGCGTGCTTGAAGCGCACAAGGCTTGGCTGGC
GCAGGGATTTGAAGACGGAGTCTTCCTTCTGGCGGGCGCGCTGGATGATGGACCGGGTGGACTGATCCTGGCAGTTGGCG
AGGACCGCGCCGCGTTGGAGGAGAGACTTGCGACAGATCCTTTTGTGCGCGACGGGCTGGTTGCGGTGGATATCACCGCC
TTCACCCCCTCTCAGGCGGATCCGCGGCTTTCATTCCTCAAGGTGGCGGCATGA

Upstream 100 bases:

>100_bases
GCACTGATCGAGGCAGAGGTGCAGCAGATGACAGACTGGGCGCGTCAACAGATCGCCGCGCCCGCCTGAGATACAATTCA
TAACACGAAGGAGGATCACC

Downstream 100 bases:

>100_bases
GCCGCGTTGTTACAGGCGGGGATGGCCGCACGCGCTGCGCCTGGTCTGCCTCGGCCCCGGAGTTTGACGCCTACCATGAC
ACAGAGTGGGGTTTCCCCGT

Product: YCII-related

Products: NA

Alternate protein names: YCII-Related Domain Superfamily Protein; YCII-Related

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MFVICLKLTADRERISGVLEAHKAWLAQGFEDGVFLLAGALDDGPGGLILAVGEDRAALEERLATDPFVRDGLVAVDITA
FTPSQADPRLSFLKVAA

Sequences:

>Translated_97_residues
MFVICLKLTADRERISGVLEAHKAWLAQGFEDGVFLLAGALDDGPGGLILAVGEDRAALEERLATDPFVRDGLVAVDITA
FTPSQADPRLSFLKVAA
>Mature_97_residues
MFVICLKLTADRERISGVLEAHKAWLAQGFEDGVFLLAGALDDGPGGLILAVGEDRAALEERLATDPFVRDGLVAVDITA
FTPSQADPRLSFLKVAA

Specific function: Unknown

COG id: COG2350

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10311; Mature: 10311

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVICLKLTADRERISGVLEAHKAWLAQGFEDGVFLLAGALDDGPGGLILAVGEDRAALE
CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHH
ERLATDPFVRDGLVAVDITAFTPSQADPRLSFLKVAA
HHHCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECC
>Mature Secondary Structure
MFVICLKLTADRERISGVLEAHKAWLAQGFEDGVFLLAGALDDGPGGLILAVGEDRAALE
CEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHH
ERLATDPFVRDGLVAVDITAFTPSQADPRLSFLKVAA
HHHCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA