Click here to switch to the map view.

The map label for this gene is 99081682

Identifier: 99081682

GI number: 99081682

Start: 1942779

End: 1943336

Strand: Reverse

Name: 99081682

Synonym: TM1040_1841

Alternate gene names: NA

Gene position: 1943336-1942779 (Counterclockwise)

Preceding gene: 99081683

Following gene: 99081674

Centisome position: 60.71

GC content: 57.89

Gene sequence:

>558_bases
ATGGCGGAACAGGATAAGCCTCTGCTGATCAAACGCTATGCCAGTCGCAGGCTCTACAATACGGAGACCAGCGATTACGT
GACACTGGAAGACATCGCCGGTTTTATCCGCGATGGGCGGGAAGTGCAGATCATTGATCTCAAGACCGGGGATGACCTGA
CCCGACAGTATCTGCTTCAGATCATTGCCGAGCATGAGAGCCGGGGCGAAAATGTGCTGCCGGTCAATGTGCTGAATGAT
CTGGTGCGCAGCTACATGGTGCCCGGAGGCGGGGTGATGCCGCAGTTTCTGCAGGCTTCTTTTGACATGTTTCGCGACAG
CCAGTCGAAGATGATGGAGAACATGAATGCGATGAACCCGATGGCGCAGATGCCCGGGTTCGAGGCAATGAAAGCCCAGC
AGGAAGCGTTTCTGAAGGCCATGACCGGCGGCTTTGGCGGCGGCTGGACCGGCGGCGGTGGCGAGGACGGCAGCCCTGCG
GCAGAGGGCGAAGAAGATCTGGGCGACATCAAACGCCAACTAGCCGAGTTGCAAGAGAAGCTCTCCAAGCTGAGCTGA

Upstream 100 bases:

>100_bases
GACGGCATCGGCGGCATCTCCTTTTGCTTTCAGCACTTTCTTTTTGAGACAGGCTCGCCTAGGGTTTTCTGCAACGCGCA
GATGTTCGGGAGAGAAAAGA

Downstream 100 bases:

>100_bases
GACGGCAGAGTGCCACCCGTGATAAGAAAGCCCCGGATAATCCGGGGCTTTTTTGCGTTTGGGGGTGCGCGTGGACATGC
TGCGCGGGAGCGCTCCCGCC

Product: polyhydroxyalkonate synthesis repressor, PhaR

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MAEQDKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIIDLKTGDDLTRQYLLQIIAEHESRGENVLPVNVLND
LVRSYMVPGGGVMPQFLQASFDMFRDSQSKMMENMNAMNPMAQMPGFEAMKAQQEAFLKAMTGGFGGGWTGGGGEDGSPA
AEGEEDLGDIKRQLAELQEKLSKLS

Sequences:

>Translated_185_residues
MAEQDKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIIDLKTGDDLTRQYLLQIIAEHESRGENVLPVNVLND
LVRSYMVPGGGVMPQFLQASFDMFRDSQSKMMENMNAMNPMAQMPGFEAMKAQQEAFLKAMTGGFGGGWTGGGGEDGSPA
AEGEEDLGDIKRQLAELQEKLSKLS
>Mature_184_residues
AEQDKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIIDLKTGDDLTRQYLLQIIAEHESRGENVLPVNVLNDL
VRSYMVPGGGVMPQFLQASFDMFRDSQSKMMENMNAMNPMAQMPGFEAMKAQQEAFLKAMTGGFGGGWTGGGGEDGSPAA
EGEEDLGDIKRQLAELQEKLSKLS

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 20506; Mature: 20374

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQDKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIIDLKTGDDLTRQYLLQ
CCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
IIAEHESRGENVLPVNVLNDLVRSYMVPGGGVMPQFLQASFDMFRDSQSKMMENMNAMNP
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCH
MAQMPGFEAMKAQQEAFLKAMTGGFGGGWTGGGGEDGSPAAEGEEDLGDIKRQLAELQEK
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LSKLS
HHHCC
>Mature Secondary Structure 
AEQDKPLLIKRYASRRLYNTETSDYVTLEDIAGFIRDGREVQIIDLKTGDDLTRQYLLQ
CCCCCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH
IIAEHESRGENVLPVNVLNDLVRSYMVPGGGVMPQFLQASFDMFRDSQSKMMENMNAMNP
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHCCH
MAQMPGFEAMKAQQEAFLKAMTGGFGGGWTGGGGEDGSPAAEGEEDLGDIKRQLAELQEK
HHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LSKLS
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763384 [H]