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The map label for this gene is yiaM [C]

Identifier: 99081653

GI number: 99081653

Start: 1904218

End: 1904895

Strand: Reverse

Name: yiaM [C]

Synonym: TM1040_1812

Alternate gene names: 99081653

Gene position: 1904895-1904218 (Counterclockwise)

Preceding gene: 99081654

Following gene: 99081652

Centisome position: 59.51

GC content: 58.41

Gene sequence:

>678_bases
ATGTCGGGGGCAAGAACCGGCCCGTCGGGGTTCATCCACACACTTGAGGAATCGCTGATCGCGCTGATCCTGGGAGCAAT
GACCTTGCTCACCTTTGCCAATGTGATCGCGCGCTATGTCTTCAATTCCAACATCCTCTGGGCGCTCGAAGTCACGGTGT
TCCTGTTTGCATGGCTGGTGCTTTTGGGCGCGGCTTATGCGGTGAAGGTACACGCACATCTGGGCGTTGATGCGATCATC
AATATGCTGCCCCAGGGCGCGCGGCGTATCCTCGGCCTCATTGCGGCGGCTGCCTGCATCATTTTCTCGTTGCTGATGCT
CAAGGGCGCCTATGACTATTGGGCCGTCTTTGCGGATCTGCCGCCCACCTCGGGACGCTGGTTTCCCACCGGTTTCGACG
TGAAGGCGCGCAGCCAGAGCTTTTATGAGGTGCAGGACGTGCCCATGATCGGGGCGCTGCGTTTCCTTGAGGATCTCATC
AATTACGGCGATTCCTACGAGAAGATGCCCAAGGTGGTGCCCTATCTCGTGTTGCCGCTGTCGATGCTGTTGCTGGTGAT
CCGCTTTGTTCAGGCGGCTGTTCAAATCCTGCGCGGGCAGACGGACCGTCTGGTTGCAAGTCACGAAGTCGAAGACGAAC
TCGAAGCGGTTCGCGCTCAACGGGGAGAGCATGACTGA

Upstream 100 bases:

>100_bases
TCAGACACCAAATTGATCAGAGCGCGGCGCGCTGCGCTCTGACACCCAAGCGGTCGAGATACGCTCACCGCACCCATTTC
CCAAAAAACTGGAGATCATA

Downstream 100 bases:

>100_bases
TGGAAGTGGTTCTTCTTTTTACACTGGTCATTGGCCTTTTGCTGATCGGGGTGCCGATTGCGGTTTCTCTGGGTCTGTCG
TCCACCATTTTCCTGCTGAT

Product: tripartite ATP-independent periplasmic transporter DctQ

Products: NA

Alternate protein names: Trap Transporter Dctq Subunit; C4-Dicarboxylate Transport Protein DctQ; C4-Dicarboxylate Transporter; C4-Dicarboxylate Transport System Permease Small Subunit; C4-Dicarboxylate Transporter Small Permease Component; C4-Dicarboxylate Transport System Permease Protein; TRAP-Type C4-Dicarboxylate Transporter Small Permease; TRAP Transporter DctQ-Like Membrane Protein; TRAP Transporter DctQ Subunit

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSGARTGPSGFIHTLEESLIALILGAMTLLTFANVIARYVFNSNILWALEVTVFLFAWLVLLGAAYAVKVHAHLGVDAII
NMLPQGARRILGLIAAAACIIFSLLMLKGAYDYWAVFADLPPTSGRWFPTGFDVKARSQSFYEVQDVPMIGALRFLEDLI
NYGDSYEKMPKVVPYLVLPLSMLLLVIRFVQAAVQILRGQTDRLVASHEVEDELEAVRAQRGEHD

Sequences:

>Translated_225_residues
MSGARTGPSGFIHTLEESLIALILGAMTLLTFANVIARYVFNSNILWALEVTVFLFAWLVLLGAAYAVKVHAHLGVDAII
NMLPQGARRILGLIAAAACIIFSLLMLKGAYDYWAVFADLPPTSGRWFPTGFDVKARSQSFYEVQDVPMIGALRFLEDLI
NYGDSYEKMPKVVPYLVLPLSMLLLVIRFVQAAVQILRGQTDRLVASHEVEDELEAVRAQRGEHD
>Mature_224_residues
SGARTGPSGFIHTLEESLIALILGAMTLLTFANVIARYVFNSNILWALEVTVFLFAWLVLLGAAYAVKVHAHLGVDAIIN
MLPQGARRILGLIAAAACIIFSLLMLKGAYDYWAVFADLPPTSGRWFPTGFDVKARSQSFYEVQDVPMIGALRFLEDLIN
YGDSYEKMPKVVPYLVLPLSMLLLVIRFVQAAVQILRGQTDRLVASHEVEDELEAVRAQRGEHD

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24912; Mature: 24780

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGARTGPSGFIHTLEESLIALILGAMTLLTFANVIARYVFNSNILWALEVTVFLFAWLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLGAAYAVKVHAHLGVDAIINMLPQGARRILGLIAAAACIIFSLLMLKGAYDYWAVFADL
HHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PPTSGRWFPTGFDVKARSQSFYEVQDVPMIGALRFLEDLINYGDSYEKMPKVVPYLVLPL
CCCCCCCCCCCCCCHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SMLLLVIRFVQAAVQILRGQTDRLVASHEVEDELEAVRAQRGEHD
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGARTGPSGFIHTLEESLIALILGAMTLLTFANVIARYVFNSNILWALEVTVFLFAWLV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LLGAAYAVKVHAHLGVDAIINMLPQGARRILGLIAAAACIIFSLLMLKGAYDYWAVFADL
HHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PPTSGRWFPTGFDVKARSQSFYEVQDVPMIGALRFLEDLINYGDSYEKMPKVVPYLVLPL
CCCCCCCCCCCCCCHHCCCCHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
SMLLLVIRFVQAAVQILRGQTDRLVASHEVEDELEAVRAQRGEHD
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA