| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99081641
Identifier: 99081641
GI number: 99081641
Start: 1891610
End: 1892491
Strand: Reverse
Name: 99081641
Synonym: TM1040_1800
Alternate gene names: NA
Gene position: 1892491-1891610 (Counterclockwise)
Preceding gene: 99081642
Following gene: 99081638
Centisome position: 59.12
GC content: 64.97
Gene sequence:
>882_bases ATGCTGGAGCCCTGTCAGCCGGAGGCCGCCATGCAGCAGAGCTTTGAGATCCGCCCGCTCACGCGCGATGAAATCGATGT GGCCGTGACCTGGGCCGCGCATGAAGGCTGGAACCCCGGCCCAAGCGATGCGACCTGTTTTGCGGCACAGGATGAACGCG GGTTCTGGGGCGGCTTTCTTGAGGGCGAGATGATCGCCTGCATTTCTGTTGTGACCTATGGCGCGGCCTTTGCCTTTTTG GGGTTTTACATTGTGGCGCCTCAGCACCGGGGGCAGGGCTATGGGTATGCGCTCTGGCAACGCGCCCTTGAGCATGCGGG CCAGCGCAGCGTTGGCCTCGATGGGGTGGTGGACCAGCAGGAAAACTACCGCCGCTCCGGCTTTGATCTGGCGTGGAGCA ACATTCGTTTCGGCGGCGTGCTGGACGCGGTGCCGCGGGCTTCTGACGCCTTCAGCCTGACGTGGCTGGACGGGCTGACG CAGGATGTGGCGGCGTTTGACGCGCGCGTGTTTCCAGCACCGCGCCCGGCCTTCTGGCAGCACTGGCTGAGGGCGCCGGG ACATGTGAGCATCGCGGCCTATGACGAGACCGGGATCAGCGGCTTTGGCACCCTGCGGCGCTGCGAGACCGGCGCCAAGA TCGCGCCTCTCGTGGCAACCTCGCGGGAGGCGGCACAAGCTGTGCTGGCAGGGCTGCTCCGGGACTGGCCCAAAGACGAA GAGGTCTTTCTTGATGTGCCAGAACCGAATGCGGCAGCGGTGGCCCTGGCACGCGATCTCGGTCTGGTGCCCGTGTTTGA AACCGCGCGCATGTACCGGGGACGTCGCCCCGAAGTTGCGCGGGATCTTATCTATGGCGTGACAAGCTTCGAGTTGGGCT GA
Upstream 100 bases:
>100_bases CACGGTGCCCAATGTGTTCTTGCCCGCCGAGGGGCGCGCAATGTGGCTGACGGTGCCGCGCGACCGGTGTTTTGTCTTCA CACGGTGATCTTCTCCCGGC
Downstream 100 bases:
>100_bases TCCCTTCAGGAGCCCTCACGCGCATCCTCGCAGGCTTGATAATCCTGCAAGCGTTTGCCCGGTTCATCTACAAAAAGCTC AGGCAAGGCCTCGGCCGTCT
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Protein; Ribosomal-Protein-Alanine Acetyltransferase; Ribosomal-Protein-Alanine N-Acetyltransferase; Acetyltransferase GNAT Family Protein; Acetyltransferase Family Protein; Acetyltransferase Gnat Family; GCN5-Like N-Acetyltransferase; Acetyltransferase Gnat Family Protein; N-Acetyltransferase
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MLEPCQPEAAMQQSFEIRPLTRDEIDVAVTWAAHEGWNPGPSDATCFAAQDERGFWGGFLEGEMIACISVVTYGAAFAFL GFYIVAPQHRGQGYGYALWQRALEHAGQRSVGLDGVVDQQENYRRSGFDLAWSNIRFGGVLDAVPRASDAFSLTWLDGLT QDVAAFDARVFPAPRPAFWQHWLRAPGHVSIAAYDETGISGFGTLRRCETGAKIAPLVATSREAAQAVLAGLLRDWPKDE EVFLDVPEPNAAAVALARDLGLVPVFETARMYRGRRPEVARDLIYGVTSFELG
Sequences:
>Translated_293_residues MLEPCQPEAAMQQSFEIRPLTRDEIDVAVTWAAHEGWNPGPSDATCFAAQDERGFWGGFLEGEMIACISVVTYGAAFAFL GFYIVAPQHRGQGYGYALWQRALEHAGQRSVGLDGVVDQQENYRRSGFDLAWSNIRFGGVLDAVPRASDAFSLTWLDGLT QDVAAFDARVFPAPRPAFWQHWLRAPGHVSIAAYDETGISGFGTLRRCETGAKIAPLVATSREAAQAVLAGLLRDWPKDE EVFLDVPEPNAAAVALARDLGLVPVFETARMYRGRRPEVARDLIYGVTSFELG >Mature_293_residues MLEPCQPEAAMQQSFEIRPLTRDEIDVAVTWAAHEGWNPGPSDATCFAAQDERGFWGGFLEGEMIACISVVTYGAAFAFL GFYIVAPQHRGQGYGYALWQRALEHAGQRSVGLDGVVDQQENYRRSGFDLAWSNIRFGGVLDAVPRASDAFSLTWLDGLT QDVAAFDARVFPAPRPAFWQHWLRAPGHVSIAAYDETGISGFGTLRRCETGAKIAPLVATSREAAQAVLAGLLRDWPKDE EVFLDVPEPNAAAVALARDLGLVPVFETARMYRGRRPEVARDLIYGVTSFELG
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32140; Mature: 32140
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEPCQPEAAMQQSFEIRPLTRDEIDVAVTWAAHEGWNPGPSDATCFAAQDERGFWGGFL CCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCC EGEMIACISVVTYGAAFAFLGFYIVAPQHRGQGYGYALWQRALEHAGQRSVGLDGVVDQQ CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCH ENYRRSGFDLAWSNIRFGGVLDAVPRASDAFSLTWLDGLTQDVAAFDARVFPAPRPAFWQ HHHHHCCCCEEECCEEECCHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHH HWLRAPGHVSIAAYDETGISGFGTLRRCETGAKIAPLVATSREAAQAVLAGLLRDWPKDE HHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCC EVFLDVPEPNAAAVALARDLGLVPVFETARMYRGRRPEVARDLIYGVTSFELG CEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLEPCQPEAAMQQSFEIRPLTRDEIDVAVTWAAHEGWNPGPSDATCFAAQDERGFWGGFL CCCCCCCHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCC EGEMIACISVVTYGAAFAFLGFYIVAPQHRGQGYGYALWQRALEHAGQRSVGLDGVVDQQ CCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCH ENYRRSGFDLAWSNIRFGGVLDAVPRASDAFSLTWLDGLTQDVAAFDARVFPAPRPAFWQ HHHHHCCCCEEECCEEECCHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHH HWLRAPGHVSIAAYDETGISGFGTLRRCETGAKIAPLVATSREAAQAVLAGLLRDWPKDE HHHCCCCCEEEEEECCCCCCCHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCC EVFLDVPEPNAAAVALARDLGLVPVFETARMYRGRRPEVARDLIYGVTSFELG CEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA