| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is surE
Identifier: 99081632
GI number: 99081632
Start: 1884712
End: 1885494
Strand: Direct
Name: surE
Synonym: TM1040_1791
Alternate gene names: 99081632
Gene position: 1884712-1885494 (Clockwise)
Preceding gene: 99081631
Following gene: 99081633
Centisome position: 58.88
GC content: 64.11
Gene sequence:
>783_bases ATGCGCATTCTGGTCACCAATGACGACGGCATCAGCGCGCCGGGGCTGGCGGTCCTTGAACAGATCGCAACAGAGCTGGC CGGCCCCGAGGGCGAAGTCTGGATCGTCGCACCCGCCTTCGAACAATCCGGCGTTGGCCATTGCATCAGCTACACCCACC CCTCGATCCTCTCCGAGCTTGGACCCCGCCGATTTGCCGCCGAGGGCTCGCCGGCCGACTGTGTTCTCGCGGCCCTTCAT GTGGTGATGAAGGACACCCCGCCGGACCTGATCCTATCGGGGGTAAACCGGGGCAACAACTCTGCCGAAAACGCCCTGTA TTCAGGCACCCTTGGCGGCGCGATGGAGGGCGCCCTTCAGGGCGTGCCCGCAATGGCGCTTTCGCAATATTACGGCAGCG GCAATCGCGACCTGGAGAACCCCTTTGAGGCCGCGCGTGCACATGGCGCGGAGGTGGTGCGCAAACTCCTGTCCGCCACG CCGCAGAACGACAGCCCCTACCGGCTCTTTTACAACATCAACTTCCCTCCCGTGGCCGCCGGGGATGTGAAGGGCATCAA AGTCACCACCCAGGGCTGCCGCAGTGGCAAGCGCTTCTCCGCAGAAGAGCAGTTCTCCCCCAACGGCAAGCGCTTCATCT GGGTGAAGGGCGGCGACCAGCAGGTATCCACCGCGCCGGAAACGGACGCGGCGGCAAACCTCGACGGGTTCATCTCTGTC ACTCCCATGCGCGCGGATCTCACTGCGCATGACGCTGTGGAGGCCTTGAAGGCGATCGAATGA
Upstream 100 bases:
>100_bases CAGCGCCCCGCCACCTATTCAGGGCGCAACTGCCACGGCCCGTTCGACCGGCGCCCTGGCATCGAAACCTGAAAATTTCG CAGACATGCAAGGGGTCAAA
Downstream 100 bases:
>100_bases GCGGGCCTGACGCGCAAACCAAGATGCAGTTTCTCTTTGCCCTGCGCTCGCGCGGGGTCACCGAAGCTGCCGTTCTGGAA GCCATGGAGGCCGTGGATCG
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRILVTNDDGISAPGLAVLEQIATELAGPEGEVWIVAPAFEQSGVGHCISYTHPSILSELGPRRFAAEGSPADCVLAALH VVMKDTPPDLILSGVNRGNNSAENALYSGTLGGAMEGALQGVPAMALSQYYGSGNRDLENPFEAARAHGAEVVRKLLSAT PQNDSPYRLFYNINFPPVAAGDVKGIKVTTQGCRSGKRFSAEEQFSPNGKRFIWVKGGDQQVSTAPETDAAANLDGFISV TPMRADLTAHDAVEALKAIE
Sequences:
>Translated_260_residues MRILVTNDDGISAPGLAVLEQIATELAGPEGEVWIVAPAFEQSGVGHCISYTHPSILSELGPRRFAAEGSPADCVLAALH VVMKDTPPDLILSGVNRGNNSAENALYSGTLGGAMEGALQGVPAMALSQYYGSGNRDLENPFEAARAHGAEVVRKLLSAT PQNDSPYRLFYNINFPPVAAGDVKGIKVTTQGCRSGKRFSAEEQFSPNGKRFIWVKGGDQQVSTAPETDAAANLDGFISV TPMRADLTAHDAVEALKAIE >Mature_260_residues MRILVTNDDGISAPGLAVLEQIATELAGPEGEVWIVAPAFEQSGVGHCISYTHPSILSELGPRRFAAEGSPADCVLAALH VVMKDTPPDLILSGVNRGNNSAENALYSGTLGGAMEGALQGVPAMALSQYYGSGNRDLENPFEAARAHGAEVVRKLLSAT PQNDSPYRLFYNINFPPVAAGDVKGIKVTTQGCRSGKRFSAEEQFSPNGKRFIWVKGGDQQVSTAPETDAAANLDGFISV TPMRADLTAHDAVEALKAIE
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=269, Percent_Identity=33.457249070632, Blast_Score=127, Evalue=6e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_SILST (Q1GFP2)
Other databases:
- EMBL: CP000377 - RefSeq: YP_613786.1 - ProteinModelPortal: Q1GFP2 - SMR: Q1GFP2 - STRING: Q1GFP2 - GeneID: 4076820 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_1791 - NMPDR: fig|292414.1.peg.234 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: PACAPDE - PhylomeDB: Q1GFP2 - ProtClustDB: PRK13931 - BioCyc: SSP292414:TM1040_1791-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 27408; Mature: 27408
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILVTNDDGISAPGLAVLEQIATELAGPEGEVWIVAPAFEQSGVGHCISYTHPSILSEL CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEECCCCHHHHHHC GPRRFAAEGSPADCVLAALHVVMKDTPPDLILSGVNRGNNSAENALYSGTLGGAMEGALQ CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCEECCCCCHHHHHHHC GVPAMALSQYYGSGNRDLENPFEAARAHGAEVVRKLLSATPQNDSPYRLFYNINFPPVAA CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC GDVKGIKVTTQGCRSGKRFSAEEQFSPNGKRFIWVKGGDQQVSTAPETDAAANLDGFISV CCCCCEEEECHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEE TPMRADLTAHDAVEALKAIE CCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MRILVTNDDGISAPGLAVLEQIATELAGPEGEVWIVAPAFEQSGVGHCISYTHPSILSEL CEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEECCCCHHHHHHC GPRRFAAEGSPADCVLAALHVVMKDTPPDLILSGVNRGNNSAENALYSGTLGGAMEGALQ CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCEECCCCCHHHHHHHC GVPAMALSQYYGSGNRDLENPFEAARAHGAEVVRKLLSATPQNDSPYRLFYNINFPPVAA CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC GDVKGIKVTTQGCRSGKRFSAEEQFSPNGKRFIWVKGGDQQVSTAPETDAAANLDGFISV CCCCCEEEECHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEE TPMRADLTAHDAVEALKAIE CCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA