Click here to switch to the map view.

The map label for this gene is yagQ [H]

Identifier: 99081609

GI number: 99081609

Start: 1859476

End: 1860504

Strand: Reverse

Name: yagQ [H]

Synonym: TM1040_1768

Alternate gene names: 99081609

Gene position: 1860504-1859476 (Counterclockwise)

Preceding gene: 99081610

Following gene: 99081608

Centisome position: 58.12

GC content: 63.56

Gene sequence:

>1029_bases
ATGACAATTGCGGGCATGACATCTGGCACACTCTCCAATGCAGAAGAGGGATCGCTCTCTCGTTTTGACGCGGCCCCTGA
ACTGGCCCTTGCATGGCATCGCGCGGGTCAGGGCGCTGTTCTATGTACGGTTGTGCAGACCTGGGGATCCGCGCCGCGGC
GCACCGGTTCGCAGCTTGTGGTCGGTGGCGACGGGCGCATCGAAGGCTCCGTGTCTGGCGGCTGCGTCGAGGGCGCCGTC
GTCGTTGAGGCGCAGGAGGCTTTGGCGCAGGGCTGTCACAAGCTGTTGGAATTCGGCGTGAGCGATGGCGACGCCTTTGC
GGTTGGACTGGCATGCGGCGGCACCATCAAGGTTCTGTTGGAACCTGTGGGGTCCGTATTGAAAGAAGAGACGCTCGACG
CGCTGGTGACGGCCCGCAGAGAAAGAGAGGCGGTCGCCTATGAAGTGAGCCTGAAAAGCGGCAAAGGCCGATTGGTCGAG
GCGGGCGCCTATCCCGAACGCCTGCGGATGGATCGCTCCGGGGTGGAGGAAGACGGCAATACCTTTGTTGCCGTGCATAA
CCCGCCCCTGCGCTTGATCGTGGTCGGAGCCGTCCATATCGCGCAGGCGCTTGTCCCCATGGCGCAGATCGCGGGCTATG
ATCCGGTTGTGATCGAGCCCCGCGCGGCCTTTGGCTCTGAAGAGCGGTTTCCCGGGGTGCGTATTCTCGAGGATTGGCCG
GATGACGCGGTGGCCCAGATCGGCTTTGACAGCCGTTGCGCCCTGGTCCTGCTGACCCATGATCCCAAGCTCGATGATCC
GGCGCTGATGGCCGCGTTGCGGTCAGAGTGTTTCTACATCGGCGCACTTGGCTCCAATCGCACGCACGGGCAACGCCGCG
AACGAATGATCGAGGCCGGATTTGGCACTGCTGACATCGCGCGCATCCATGGCCCGGTCGGGTTGGACATCGGCGCCGCC
AGCCCCTCGGAAATTGCGGTGTCGATCCTTGCCGAGATCACAGCAGTGCTGCGGGGCAAGGCGGAATGA

Upstream 100 bases:

>100_bases
CCGCCTCGCGCAGCAGTGCCGCACGATTTGGCCTTGCACTTCGCGCCCGTCGCTCCATGCTTTGTGCGAACCATTGGCCA
CTGGCACCGGGATCTCTGAC

Downstream 100 bases:

>100_bases
AATTCGGACCCGTACCCTTGCGCGCGGCGCTGGGCACGATTGCGGCACATTCCATTCGCGCAGCCGCACGTCCCTATGGC
TCCGGGCGGGACTATAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MTIAGMTSGTLSNAEEGSLSRFDAAPELALAWHRAGQGAVLCTVVQTWGSAPRRTGSQLVVGGDGRIEGSVSGGCVEGAV
VVEAQEALAQGCHKLLEFGVSDGDAFAVGLACGGTIKVLLEPVGSVLKEETLDALVTARREREAVAYEVSLKSGKGRLVE
AGAYPERLRMDRSGVEEDGNTFVAVHNPPLRLIVVGAVHIAQALVPMAQIAGYDPVVIEPRAAFGSEERFPGVRILEDWP
DDAVAQIGFDSRCALVLLTHDPKLDDPALMAALRSECFYIGALGSNRTHGQRRERMIEAGFGTADIARIHGPVGLDIGAA
SPSEIAVSILAEITAVLRGKAE

Sequences:

>Translated_342_residues
MTIAGMTSGTLSNAEEGSLSRFDAAPELALAWHRAGQGAVLCTVVQTWGSAPRRTGSQLVVGGDGRIEGSVSGGCVEGAV
VVEAQEALAQGCHKLLEFGVSDGDAFAVGLACGGTIKVLLEPVGSVLKEETLDALVTARREREAVAYEVSLKSGKGRLVE
AGAYPERLRMDRSGVEEDGNTFVAVHNPPLRLIVVGAVHIAQALVPMAQIAGYDPVVIEPRAAFGSEERFPGVRILEDWP
DDAVAQIGFDSRCALVLLTHDPKLDDPALMAALRSECFYIGALGSNRTHGQRRERMIEAGFGTADIARIHGPVGLDIGAA
SPSEIAVSILAEITAVLRGKAE
>Mature_341_residues
TIAGMTSGTLSNAEEGSLSRFDAAPELALAWHRAGQGAVLCTVVQTWGSAPRRTGSQLVVGGDGRIEGSVSGGCVEGAVV
VEAQEALAQGCHKLLEFGVSDGDAFAVGLACGGTIKVLLEPVGSVLKEETLDALVTARREREAVAYEVSLKSGKGRLVEA
GAYPERLRMDRSGVEEDGNTFVAVHNPPLRLIVVGAVHIAQALVPMAQIAGYDPVVIEPRAAFGSEERFPGVRILEDWPD
DAVAQIGFDSRCALVLLTHDPKLDDPALMAALRSECFYIGALGSNRTHGQRRERMIEAGFGTADIARIHGPVGLDIGAAS
PSEIAVSILAEITAVLRGKAE

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=302, Percent_Identity=33.4437086092715, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1789240, Length=298, Percent_Identity=26.8456375838926, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 35828; Mature: 35697

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIAGMTSGTLSNAEEGSLSRFDAAPELALAWHRAGQGAVLCTVVQTWGSAPRRTGSQLV
CEECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCEEE
VGGDGRIEGSVSGGCVEGAVVVEAQEALAQGCHKLLEFGVSDGDAFAVGLACGGTIKVLL
ECCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHH
EPVGSVLKEETLDALVTARREREAVAYEVSLKSGKGRLVEAGAYPERLRMDRSGVEEDGN
HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCC
TFVAVHNPPLRLIVVGAVHIAQALVPMAQIAGYDPVVIEPRAAFGSEERFPGVRILEDWP
EEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCEEECCCC
DDAVAQIGFDSRCALVLLTHDPKLDDPALMAALRSECFYIGALGSNRTHGQRRERMIEAG
CHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCC
FGTADIARIHGPVGLDIGAASPSEIAVSILAEITAVLRGKAE
CCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TIAGMTSGTLSNAEEGSLSRFDAAPELALAWHRAGQGAVLCTVVQTWGSAPRRTGSQLV
EECCCCCCCCCCCCCCCCHHHCCCCHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCEEE
VGGDGRIEGSVSGGCVEGAVVVEAQEALAQGCHKLLEFGVSDGDAFAVGLACGGTIKVLL
ECCCCEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHH
EPVGSVLKEETLDALVTARREREAVAYEVSLKSGKGRLVEAGAYPERLRMDRSGVEEDGN
HHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEEECCCCHHHHHHCCCCCCCCCC
TFVAVHNPPLRLIVVGAVHIAQALVPMAQIAGYDPVVIEPRAAFGSEERFPGVRILEDWP
EEEEEECCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCCCCCCCEEECCCC
DDAVAQIGFDSRCALVLLTHDPKLDDPALMAALRSECFYIGALGSNRTHGQRRERMIEAG
CHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHCC
FGTADIARIHGPVGLDIGAASPSEIAVSILAEITAVLRGKAE
CCCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]