| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99081586
Identifier: 99081586
GI number: 99081586
Start: 1839068
End: 1839442
Strand: Reverse
Name: 99081586
Synonym: TM1040_1745
Alternate gene names: NA
Gene position: 1839442-1839068 (Counterclockwise)
Preceding gene: 99081587
Following gene: 99081585
Centisome position: 57.47
GC content: 58.93
Gene sequence:
>375_bases GTGAGCATCCTGCGCGCCATATTTGCGATCCCCTTGATTGCCCTGTTCTTGATCGGACCTCTGATCGAGAGCGCAGCGCA TGCCAAAGGGGCAGGTTGTCTTAACGTGCAATGCTGTGATCGCGGACCAGAGGAAACCTTGGTTTCAAAGACTGAGGTTT CAAAGACCGATCCAAGCACTCAGATGGAAGCGAGCGCCGGGGACGATCTGGCCATGAAGGGCACTTGTGCGCTGATGGCC TGCCAGGCCGCTGCGCTGGTTGGGGTGCCGGCGATGGTGCATCCCCTCACGTTTCAGACAAGCTCCTGGGTTCAGATTGA CCTCTCCCCACTCTCTCAGGGGCCCTCCGCGCTTGATCGGCCACCTAACAGCTGA
Upstream 100 bases:
>100_bases CGATGTATTGCGCATTTGTCCGGTGTTCAGCACGAAAATGTCATGCGGGCGCCACGGCATGACAGTTGTTTCAACGCGCT CACTCCGCTAGGCAGGTGGG
Downstream 100 bases:
>100_bases ACAAGGCAACGCCCCGGATGGCGTCTAGCTTTGTATTCAGACTGTTAGGAGAACTCCATGAACCAGAAATACCTGATCCT AGGTGCCAGCGTCGCACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSILRAIFAIPLIALFLIGPLIESAAHAKGAGCLNVQCCDRGPEETLVSKTEVSKTDPSTQMEASAGDDLAMKGTCALMA CQAAALVGVPAMVHPLTFQTSSWVQIDLSPLSQGPSALDRPPNS
Sequences:
>Translated_124_residues MSILRAIFAIPLIALFLIGPLIESAAHAKGAGCLNVQCCDRGPEETLVSKTEVSKTDPSTQMEASAGDDLAMKGTCALMA CQAAALVGVPAMVHPLTFQTSSWVQIDLSPLSQGPSALDRPPNS >Mature_123_residues SILRAIFAIPLIALFLIGPLIESAAHAKGAGCLNVQCCDRGPEETLVSKTEVSKTDPSTQMEASAGDDLAMKGTCALMAC QAAALVGVPAMVHPLTFQTSSWVQIDLSPLSQGPSALDRPPNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12865; Mature: 12734
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILRAIFAIPLIALFLIGPLIESAAHAKGAGCLNVQCCDRGPEETLVSKTEVSKTDPST CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC QMEASAGDDLAMKGTCALMACQAAALVGVPAMVHPLTFQTSSWVQIDLSPLSQGPSALDR CCCCCCCCCEECCHHHHHHHHHHHHHHCCCHHHCCEEECCCCEEEEECCCCCCCCCCCCC PPNS CCCC >Mature Secondary Structure SILRAIFAIPLIALFLIGPLIESAAHAKGAGCLNVQCCDRGPEETLVSKTEVSKTDPST HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCC QMEASAGDDLAMKGTCALMACQAAALVGVPAMVHPLTFQTSSWVQIDLSPLSQGPSALDR CCCCCCCCCEECCHHHHHHHHHHHHHHCCCHHHCCEEECCCCEEEEECCCCCCCCCCCCC PPNS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA